Elaeis guineensis (African oil palm): 105038293
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Entry
105038293 CDS
T03921
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105038293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105038293
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105038293
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105038293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105038293
NCBI-ProteinID:
XP_010912355
UniProt:
A0A6I9QNS8
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Position
1:105827970..105829025
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AA seq
282 aa
AA seq
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MGGRRRRRQRSRPPVATAAMGSKPPVQIRSVWADNLDREFALIRSAVRRYPYAALDTEFP
GMVHRSAKHPFLLSPGERYALLKANVDALHLIQLGLTLSDSAAGAACLVWEFNFRDFDLR
RDLHAPESIELLRSHGIDFDEIRARGIDSRRFAELFVSSGLVRAGAVTWVTFHSAYDFGY
LIKTLTRSDLPARLEDFLRLFRVFFGDRVFDIKYMMKYCDSLYGGLDRVASILKVDRTAG
SCHHAGSDSLLTWEAFRRMREIYFGQDGAEKHAGVVYGLEVF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacgccgacgacgacgacagcggtcccgaccgccggtggccacggcggcgatg
ggttcgaaaccgccggttcagatccggtccgtgtgggccgacaatctcgaccgcgagttc
gccctgatccggtcggccgttcggcggtacccgtacgccgccctcgacacggagttcccc
ggcatggtccaccgatcggcgaagcacccgttcctcctctcccccggcgaacgttacgcc
ctcctcaaggccaacgtcgacgccctccatctcatccagctcggcctcaccctctccgac
tccgccgctggcgccgcctgcctcgtctgggagttcaatttccgcgatttcgacctgcgc
cgcgacctccacgccccggagtccatcgagctcctccgctcccacggcatcgacttcgac
gagatccgcgcccgggggatcgattcccgccgcttcgccgagctcttcgtctcgtcgggt
ctcgtccgggccggagcggtgacctgggtgaccttccacagcgcctacgacttcggctac
ctgatcaaaactctgacccgctccgatctgccggcgagattggaggattttctccggctg
tttagggttttcttcggggaccgggtgttcgacatcaagtacatgatgaagtactgcgat
agcttgtacggagggctggatcgggtggcgagcatcttgaaggttgatcggacggcgggg
agttgccatcacgcgggttcggatagcctgctcacgtgggaggcctttcggaggatgagg
gagatatacttcgggcaggatggcgcggagaagcacgcgggcgtcgtctatggactggag
gtcttctga
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