Elaeis guineensis (African oil palm): 105038400
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Entry
105038400 CDS
T03921
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105038400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105038400
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105038400
U7-dependent histone pre-mRNA processing factors
105038400
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
Motif
Other DBs
NCBI-GeneID:
105038400
NCBI-ProteinID:
XP_010912502
UniProt:
A0A6J0PGF4
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Position
1:108094957..108104758
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AA seq
547 aa
AA seq
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MAASASSQHRCVFVGNIPYDATEEQLIRICEEVGPVVSFRLVIDRETGKPKGYGFCEYKD
EETALSARRNLQGYEINGRQLRVDFAENDKNADRNREQGRGGPGLTSNAQRQSGGPSILG
DSTLHQPIGLPLAATASSLMAGALGGAQTSGIQHGLQSQSGMGNDALTCYLAGMSRHQLN
EIISEIKALATQNKPLARQLLQGNPQLPKALFQALIMLGMVTPQMMQMTSSLPSSILAPQ
PSSHLGQASSQKDALIGMLSRRSESQMPNVPQNTTDLQQSALLLPSVPVHPPHQRPLPHA
QVLQGKIPGKHGATETSSIQPQPLGGPSIQPNPPVPASKGLIPQIHPPLQQHHARPTGAA
SLAQRPLLAIPNTSLQQSLLLHPSVSRISSSNYQLPLGGLEMLSKEAGTSASVSHDPTWA
SKASTQNLGVGLVEQTRMAGDASELMSRPSKIHRLEDGSGAPQLMNGHSSSNRPISGQTI
GTGSVSVSQMTGFDGVQHSEKQMPQLTSEMESALLQQVLSLTPEQLSSLPVEQQQQVLQL
QQMLSSK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgccagctctcagcaccgatgcgtcttcgttgggaacataccttatgat
gctacggaggagcagctgattcggatatgtgaggaggttggccccgtggtgtccttcagg
ctggtaattgatagagaaactgggaagcccaaaggttatggattttgtgagtacaaggat
gaagagacagctcttagcgctcgtcgcaatcttcagggctatgaaataaatggccgtcag
ttacgagttgattttgcagaaaatgataaaaatgctgacagaaacagagagcagggtcgt
ggtggaccagggttgacatcaaatgctcagaggcaatcaggtggaccctctatccttggg
gattcaactcttcatcaacctattggtctgccattagctgcaactgcttcatctctcatg
gctggagctctaggtggggctcagacttctggcatccaacatggtttacaaagccagtct
ggaatgggaaatgatgccttgacttgttatctagctgggatgtctagacaccaattgaac
gaaattatatctgagataaaggctctggctactcaaaacaagccactggctcgacaacta
ttgcaagggaatccacagctgccaaaggctctctttcaggcactgataatgcttggcatg
gtgacaccacaaatgatgcaaatgacaagcagtctgccatcatcaattttggccccccaa
ccttcatctcatcttggccaagcatcttcgcaaaaggatgctttgattggaatgttgtcg
aggcgatctgaaagtcagatgcccaatgttccacaaaacacaacagatttacagcaatct
gcacttctgctgcccagtgtgcctgttcaccctccacatcagcgccctctgccccatgcc
caagttctccagggaaaaataccaggcaaacatggagctactgaaacatcatcaatacag
cctcagcctcttggtggcccttctattcagccaaatcctcctgtaccggcatcaaaaggc
ctgataccacaaattcaccccccacttcagcagcatcatgctagaccaactggagctgca
tctttggcgcaacgtcctctgctggccatcccaaacacaagcctccagcaatcacttttg
ctccatccttcagtatctcggatcagctcatcaaattaccaattaccactgggtggactg
gagatgctttcaaaggaagctggaacatctgcttctgttagccacgatccaacttgggca
tccaaagctagtacacaaaatttaggagtaggtttggtggagcaaacaagaatggcaggt
gatgcatcggaactgatgagtcgtccttcaaaaatacatagattggaagatggaagtggt
gctccccagttgatgaatggccattcttcttccaatagacctatttcaggtcaaacaatc
ggcactggatcagtatctgtgagtcaaatgacaggttttgatggggtgcaacattcagag
aaacagatgcctcagcttacatctgaaatggagtcagctcttctgcagcaagtactgagt
ctaacacctgagcagttaagttcattacctgtagagcagcagcagcaagtacttcaactc
caacagatgttatcaagcaagtag
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