Elaeis guineensis (African oil palm): 105038401
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Entry
105038401 CDS
T03921
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1 isoform X2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105038401
Enzymes [BR:
egu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105038401
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105038401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
AF_0924
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
105038401
NCBI-ProteinID:
XP_010912506
UniProt:
A0A6I9QS95
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All DBs
Position
1:108114117..108121056
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AA seq
321 aa
AA seq
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MASMTRIDGVRSAAFICAFLFLLVELAYGSLVLFGRNMSKSFDDIEADFAPVVRGSGESG
GIYLAEPLDACTQLNNKVINDSSSSFALIIRGGCHFDEKVRNAQNAGFKAAVIYNNEDYG
PVSAIRGIPDGITIPAVFISKASGEALREYAGDTDMELWILPRIKISEWSILAFCCISFL
VMSAGVLAPCFFVRRQYGGHEGPRASQIYGMSSRLVEAIPSLIFTSASEDNCTSQTCAIC
LEDYKVGEKLRVLPCHHKFHAVCVDSWLTTWRTFCPVCKQDVNSSTIYIPASESTPLLSS
LSSFASSSAGSLAAFPPNCAI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatgactcgtattgatggagtgaggtcggcggcttttatatgtgcttttctt
tttcttctggtggaattggcatatgggagtttggtcttgtttggcaggaacatgtccaaa
tcttttgatgacatcgaggctgacttcgctccagttgtaagaggatctggtgaaagtggt
ggcatatacctagctgagccccttgatgcatgtactcaattgaataataaagtaatcaat
gattcaagttcgtcatttgcactaatcataagaggaggatgtcattttgatgaaaaagtt
agaaatgcacagaatgctggatttaaagctgctgttatatacaataatgaagattatggt
ccagtatctgcaataagaggaatcccggatggcatcactataccggctgtctttatatct
aaagcatctggtgaggcacttagagaatatgcaggtgacacagacatggagttatggatc
ttaccaagaattaagatctcagaatggtctattttggccttctgttgcatatcttttctt
gtcatgtctgctggtgtgcttgctccatgtttttttgtgcgtagacagtatggtggacat
gaagggcctagagcttctcaaatctatgggatgagcagtcgactggtggaagcaattcca
agtctcatattcacgtcagcatcagaagacaattgcacatcacaaacatgtgctatttgc
ctagaggactacaaagtgggggagaagcttcgtgtgctgccatgtcatcacaagtttcat
gctgtttgtgttgattcttggctcaccacatggagaactttttgccctgtgtgcaagcaa
gatgttaactcaagcacaatctacattccagcctctgagtctactccactactttcttct
ctctcttcatttgcctcttcctctgctggatctttagcagcgtttccccctaactgtgca
atttga
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