KEGG   Elaeis guineensis (African oil palm): 105038935
Entry
105038935         CDS       T03921                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105038935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105038935
   03041 Spliceosome [BR:egu03041]
    105038935
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105038935
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105038935
Spliceosome [BR:egu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    105038935
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 105038935
NCBI-ProteinID: XP_010913172
UniProt: H9AWW7
LinkDB
Position
2:120636897..120648404
AA seq 413 aa
MDPTSKKRKSDENGAVVASPALLTPEDARKIVEPFTREHLLDIVREAMCRDAGVLDAVRA
IADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHI
DGALLALKEPSKKIDGRMTVTQLAAAGTTAAAPPAIDVSLRKIYVGNVPADMPSDRLLAH
FSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAIDGK
KVKPGAPAAGAAAPVGGVQGQRMGGGADIGGDGLGMGHQSSLPGSFGGYSGGGIPGAAGL
GQHHHPSSIGAGTPGLSSVGSQVPGAGGYGGGLGGPYGASSQYDGPGYGGFGGGSSLYRM
PPSSVGMPSGGYPESGHYPLSSSAYQSQHRPPTGSSPGARVPSGGGLYQNPFY
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggatcccacctcgaagaaacgcaagtccgacgagaacggcgccgtcgtggcctctccg
gccctgctgacgcccgaggatgcccgcaagatcgtggagcccttcacacgcgagcatctc
cttgacatcgtccgggaggccatgtgccgcgacgccggcgtccttgacgccgtccgagcc
attgccgaccgtgacccggcccagcgcaaacttttcatccgtggcctcggctgggagacc
accaccgagtctctccgcaacctcttctcctcgtacggtgagctcgaggaggctgtcgtc
atcgttgacaaggctacgggcaagagcaagggctacggttttatcaccttccgccacatc
gatggcgctctgcttgccctcaaggagccgtccaagaagatcgacggccgcatgaccgtc
acgcagctcgccgccgccggcaccaccgccgccgctcctcccgccatcgacgtctcgctg
cgcaagatctatgtcggaaacgtccccgctgacatgccctccgaccgcctcctcgcccac
ttctcctcctacggggagattgaggaggggccgctggggttcgacaagcagacgggaaag
ttccgggggtttgcgctcttcgtctacaagacagccgagggagctggggcatcgctagtc
gaccccaccaagaacatcgatgggcatcatctggtgtgcaaacttgcgattgacgggaag
aaggtaaagccaggggctccagccgcgggtgctgctgctccggtgggtggagtccagggc
cagcggatgggaggcggggctgatatcgggggggatgggctcggaatgggtcaccagtcc
tctttgccaggttctttcgggggttactctggcggtgggataccaggtgctgctggtctg
ggtcaacatcatcacccatcgtcaattggtgcgggcactcccggtctgtcatcggttgga
agccaggtgcctggagctggaggctatggaggaggccttggaggaccttatggggcttcc
tcgcagtatgatggtcctggctatggtggttttggcggaggatcatctttgtatcgcatg
ccaccaagctctgttgggatgccctctggtggttatcctgagagcgggcattacccgctg
tcatcatctgcttaccagagccagcaccgtccaccgactggttcatctcctggagctaga
gttccaagtggaggagggctttatcagaaccctttctactag

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