Elaeis guineensis (African oil palm): 105039105
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Entry
105039105 CDS
T03921
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105039105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105039105
03019 Messenger RNA biogenesis [BR:
egu03019
]
105039105
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105039105
RNA polymerase I system
105039105
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105039105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW2_Spt5
KOW6_SPT51-2
Spt5-NGN
KOW4_SPT5
KOW7_SPT5
KOW
KOWx_SPT5
KOW5_SPT5
Spt5_N
GPKOW_C
DUF4438
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
105039105
NCBI-ProteinID:
XP_010913406
UniProt:
A0A6I9QPY3
LinkDB
All DBs
Position
1:154008756..154022185
Genome browser
AA seq
1026 aa
AA seq
DB search
MARGGHGDEDEEFDEVEEEYDEELEDEEEDDGKVGRKRSRSQFIDDTAVEDDEEEEEDDD
EDEEFGDDNRRGRRQKRRSGSEFLDLEAAVDSDEEEEEEEGEDDFINDAGADIPDEDEGR
RVHHPSILMPEDQEDVDEMERQVYERYAKSSHIEYAEDATDVEQQALLPSVKDPKLWMVK
CAIGRERETAICLMQKFIDRSDLQIRSAVALDHLKNYIYVEAEKEAHVKEACKGLRNIYS
SAKVMLVPIKEMTDVLSVESKTVDLSRDTWVRMKLGIYKGDLAKVVDVDNVRQKVIVKLI
PRIDLQALANKLEGREVPKKKTFVPPPRFFNIDEAREMHIRVERRRDKDTGEYFEMVDGL
MFKDGFLYKTVSIRSISSQNIQPTFDELEKFRKPGDDADGDVASLSTLFANRKKGHFMKG
DAVIVVRGDLKNLMGWVEKVEDDTVHIRPKMSGLPKTLAFNEKELCKYFKPGDHVKVVSG
VQEGATGMVVKVEGHVLIIISDTTKEDIRVFADHVVESSEITTGVTRIGDYELHDLVLLD
NMSFGVIIRVESEALQVLKGVPDRPEVVLVKLREIKSKIERRINAKDRSNNIVSVKDVVR
VVEGPCKGKQGPVEHIHKGILFIYDRHHLEHAGFICAKAQSCIIVGGSHGNHDRKGLDPF
DSRFGGLRSSQFLQSPRRLPPRGPPIDFGGRGRGGRGHDSLVNKCIKIKSGPMKGYRGRV
KEVTGPLVRVELDSQMKIVTVKREDIADTNTIATPFRESRYGMGSETPMHPSRTPLHPMQ
TPMRDPGATPLHDSMRTPMRDRAWAPMSPARDGWEDGNPGTWGISPQYQPATPPARSYEA
PTPGSGWANTPGGYSEAATPRESSYGSAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMT
PGNVGLDIMSPTIGGEEGNWFMPDILVNILRPGEDSNVGIIREVLMDGSCKVTLESAGNK
EIVTALPSELEVVRPRKSDKIKIMNGSLRGVTGKLIGIDGSDGIVKLDDTYEVKILDMVI
LAKLAT
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggtggccacggcgacgaagacgaggagttcgacgaggtggaggaggagtat
gacgaggagctggaggacgaggaggaggacgacgggaaggtgggcaggaagcggagcaga
tcccagttcatcgacgataccgccgtggaggacgacgaagaagaggaagaagacgacgat
gaggatgaggagttcggcgatgataaccgccggggccggaggcagaagaggcgctccggt
tcggagttcttggatctcgaagcggccgtggatagtgacgaggaggaggaggaagaagaa
ggagaagatgattttataaatgatgctggagctgacatccctgatgaggatgaaggcaga
agggtgcatcatccatcaattctaatgccagaggatcaagaagatgttgatgagatggag
agacaggtctatgaaagatatgcaaaatcaagccatatagaatatgctgaggatgccact
gatgttgaacaacaagctctattgccatcagtcaaggatccaaaattgtggatggtgaaa
tgtgcgattggtcgtgagcgtgaaacagctatatgcctcatgcaaaaatttatagatagg
tcagatctccagatcaggtcagctgttgcattggaccatcttaaaaactatatatatgtt
gaagcagagaaagaagctcatgttaaagaggcttgcaaaggtttacggaatatatactcg
tcagcaaaggtgatgcttgtaccaataaaagaaatgactgatgttctatcagttgaaagc
aaaactgtcgatctctctagggacacatgggttcggatgaagcttggcatctataaagga
gatcttgctaaggttgttgatgttgataatgtacgccagaaagtgatagtcaaactaatc
ccaagaattgatttacaagcccttgctaataaattggaaggtagggaggttccaaagaag
aagacatttgttcctccaccacgcttttttaacattgatgaagcaagggagatgcatatc
cgtgttgagcgtaggagggacaaagatactggtgaatactttgagatggttgatggattg
atgttcaaagatggatttctgtacaaaacagtgtccataagatcaataagttcacaaaac
atacagccaacttttgatgaacttgagaaattccggaagcctggggatgatgctgatggg
gatgtagctagtttatctactttatttgcaaacaggaagaagggccatttcatgaaaggt
gatgctgttatagttgttcgtggagatctcaaaaatctgatgggatgggttgagaaagta
gaggatgatacagtccatatcagaccaaagatgtcagggttgcctaaaacgttggctttt
aatgaaaaggaactatgcaaatattttaaaccaggagaccatgtaaaagtggtctctggt
gttcaagaaggtgcaactggtatggtggtaaaagttgagggccatgttttgatcatcata
tcagacactacaaaagaagatatccgggtttttgcggatcatgttgtggagagttctgaa
ataaccactggggtcacaagaattggggattatgagttacatgatctcgtgcttctggac
aatatgtcctttggtgtaattatacgtgtggaaagtgaagcacttcaggtgctcaaaggt
gtacccgatagacctgaggttgtgcttgttaaattgagagaaataaaaagtaagattgaa
cgacgaattaatgccaaagatcgatcaaacaatatagtgtcagtcaaggatgttgtgagg
gttgttgagggaccttgcaaggggaagcaaggtcctgttgaacacatacataaagggatc
ttgttcatctatgatcgccatcatcttgagcatgctggttttatctgtgcaaaagctcag
tcgtgtataattgtaggtggatcacatgggaatcatgacagaaagggtctagatcctttt
gactcaagatttggtggtttgagatcatcccagtttcttcagtccccaagaagactgcct
cctagaggacctcctatagactttgggggacgaggcagaggtggaagaggacatgattcc
ttagtgaataaatgtattaaaattaaatctggtcccatgaagggatatcgtggcagggtt
aaagaggttacaggtcccttggtgcgggtggagctggattcacagatgaaaattgttaca
gttaagagagaggatattgcagatactaatactatagcaactccattccgtgaatctcga
tatggtatgggtagtgaaacaccaatgcatccatcacggacaccactgcatccaatgcag
actccaatgagagatcctggagccacacctttacatgatagcatgagaacgccaatgcgt
gatcgggcctgggctccaatgagccctgcaagggatggctgggaagatggaaaccctggc
acttggggaatcagtccacaatatcagccagcaactccacctgcccggtcatatgaagca
cctactcctggttcaggttgggccaacactccaggtggttatagtgaagctgcaacacca
agggaaagcagctatggaagtgcaccaagcccttacttaccatcgacacctggcggacag
ccaatgaccccaagttctgcatcttatcttcccggtactcctggtggacagcccatgaca
cctggaaatgttgggctggatattatgtctccaacaataggtggggaagaaggcaattgg
ttcatgcctgacattttggtgaacattctaaggcctggtgaggattctaatgttggaatc
atccgagaggtgctgatggatggatcatgcaaggttacccttgagtcagcaggaaacaaa
gagattgtgactgcacttccgtcggagttggaggtggtgcggccgaggaaatctgacaaa
atcaagatcatgaatggttcactccgtggagtcactggaaaactcataggcattgatggt
tctgatggaatagtgaaattagatgacacctatgaagtcaaaatattggacatggttatt
cttgctaaattagcaacatag
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integrated database retrieval system
