Elaeis guineensis (African oil palm): 105039197
Help
Entry
105039197 CDS
T03921
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105039197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105039197
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105039197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Phage_TAC_12
Motif
Other DBs
NCBI-GeneID:
105039197
NCBI-ProteinID:
XP_010913574
UniProt:
A0A6I9QSQ4
LinkDB
All DBs
Position
1:156079386..156093790
Genome browser
AA seq
484 aa
AA seq
DB search
MASLADSFLADLEDLSDNEAHLDDEEADVADMEEDADGDIADIEALNYDDLDSVSKLQKT
QRYNDIMQKVEDALQKGSDISSHGTVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL
SEENLKKTIDACDRALDLDIAKKKVLDFVESRMGYIAPNISAIVGSAVAAKLMGTAGGLS
ALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYLEQAEIFQSTPPSLRTRACRLLAAKS
TLAARVDSTRGDPTGKAGRNLREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
RKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAAK
AAKKFKEKPYGSSGATSGLTSSLAFTPVQGIELTNPQSHGNLLGSGTQSTYFSEMGTFSK
IKRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcttgccgattctttcttggctgaccttgaagatttatctgacaatgaagcc
catcttgatgatgaggaagctgatgtagcagacatggaggaggatgctgatggtgatata
gctgatattgaagcactaaactatgacgatcttgatagtgtctcaaagctgcagaagacg
caacgctataatgatattatgcagaaagttgaagatgcactccagaagggatcagatata
tctagtcatggaacagtcttagaagatgatcctgagtatcaacttattgttgattgcaat
gctttatctgtcgacattgaaaatgaaatcatcataatccacaattttatacgtgataag
taccgcttgaagtttcctgaacttgaatctcttgttcatcacccaattgattatgctcgg
gttgtgaagaagattggaaatgaggtggacttgacccttgtcgacttggagggccttcta
ccgtcagcaattattatggttgtttctgttacagcatcaactacaagtggcaagcctctg
tcagaagagaacctaaaaaaaacaattgatgcatgtgaccgagcgcttgatcttgatatt
gcaaagaagaaagttcttgattttgtagagagcaggatgggatatatcgcaccaaatatt
tctgctattgttggaagtgcagttgcagctaaacttatgggaacagctggtggcttgtca
gcattggcaaaaatgccagcttgcaacgttcagcttcttggggcaaagaagaaaaccctt
gctggattttccactgcaacctcccagtttcgtgtaggttatcttgaacaagctgagatt
tttcagagcacccctccttctttgaggacccgtgcttgtagactgttggctgcaaaatca
accctggcagcacgggtagactcaacaagaggagatccaacggggaaggctggaaggaac
ttgagagaggaaatccgtaagaagattgagaagtggcaagagccaccccctgcaaaacaa
ccaaaaccccttccagttcccgattcagagcccaaaaagaagagaggtggtcgtcgtctg
cggaaaatgaaagaaagatatgcaataactgatatgaggaagctggctaacagaatgcaa
tttggagtgccagaagaaagttcccttggtgatggcctgggtgaaggttatggcatgctt
ggtcaggcaggaagtgggaagttgcgtgtgtcaatgggtcaaagcaaacttgcagccaaa
gctgccaaaaagtttaaggagaagccctacggaagcagtggtgcaacctcaggactgaca
tcaagtctcgcattcactcctgtacagggaatagaactcacgaatccacagtctcatgga
aatctgctcggcagtggaacgcaaagcacctacttctcggagatggggacattctcaaag
atcaagagaccttaa
DBGET
integrated database retrieval system
