Elaeis guineensis (African oil palm): 105039440
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Entry
105039440 CDS
T03921
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105039440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105039440
03036 Chromosome and associated proteins [BR:
egu03036
]
105039440
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105039440
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105039440
PBAF complex
105039440
GBAF(ncBAF) complex
105039440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
105039440
NCBI-ProteinID:
XP_010913882
UniProt:
A0A6I9QVB6
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Position
1:161675621..161688682
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AA seq
475 aa
AA seq
DB search
MATPPPPAQTPGPLPANTPGPPQTPVLPVTPAVKSETPSTDVAELLPAASPRTPEPSPAA
SYTITIPSCSGWFSFGKIHETERKILPEFFDGKSVSRNPRVYKYYRDSIIRRFRRNPSRK
ITFTEGRRGLIGDVGSIRRVFDFLEEWGLINYAPSAKPSLKEKREAEEALEKKESPKKLC
SNCRSVCSIACFATDKADIILCARCFVRGNYRPGLSSTDFKRVDITEETKTDWTDKETLH
LLEAILHYGEDWKKVAEHVGGRSEKDCVARFIKLPFGEQFLGPPEIGEDGKQHEKNDQVS
AGHEEADAAMSRPIKRRHLTPLTDASNPIMAQVAFLSAMAGSDVVKAAAQAAISALYEVD
LASISSLNEAFCPNGQPVEEVVEEAATEAHSQLEKELQDVEQSVSDVVDVQMKDIQDKIA
HFEEVELQIERERLQLRYMKDLLFADHSTISQHKARLMFKGNDDLEKFRLDRNVT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcctccgccgcccgcccagacccccggcccgttgccggcgaatacccctggg
ccgccgcaaacccccgttcttccggtcacccccgctgttaaatctgagactccgtccacc
gacgtcgccgaactcctccctgccgccagtccccggacgccggaaccctcccccgcggcc
tcctacaccatcaccattcccagctgctccgggtggttttccttcggcaagatccacgag
acagagcgaaagatcctgccggagttcttcgacgggaagtcagtttcaagaaacccaagg
gtttacaagtactacagggactcgatcatcagacggttcaggagaaatccttcgaggaag
atcaccttcactgagggccggcgagggttgatcggggacgtagggtcgatccgaagggtg
tttgatttcctcgaggagtggggattgatcaattatgctccatcggcaaagcccagcttg
aaggagaagcgagaggctgaggaggctttagaaaagaaggagagccccaagaagctgtgc
agcaactgcaggtctgtctgtagcatcgcttgctttgccactgataaggcagacattatt
ctctgtgcaagatgctttgttcgtggcaactataggcctggcctcagttcaacagatttt
aaacgcgttgatatcactgaagaaacaaaaactgactggactgacaaagagactcttcac
ctacttgaggccattttgcactatggtgaagactggaaaaaggtggccgaacatgttggt
ggtagaagcgagaaagactgtgttgctagattcatcaagttgccttttggagagcagttc
ttggggcctccagaaattggggaagatggtaagcagcacgagaaaaatgatcaggtgagt
gctgggcatgaagaggcagatgctgcaatgtcacgccctataaagcgaaggcatctcaca
cccctaacagatgcaagcaacccaatcatggctcaggttgctttcttatctgccatggct
ggttcagatgtcgtcaaagctgcagctcaagctgccatttcagcattatatgaggtggac
ctggccagcatcagcagtttgaatgaggctttctgcccaaatggtcaacctgttgaagaa
gttgttgaagaggctgccacagaggcacattcacagcttgagaaggaactccaagatgtg
gagcaatctgtgtctgacgttgtggatgttcagatgaaagatatccaggataagattgca
cattttgaggaggttgaattgcagattgagagagagcggctgcaactgcggtacatgaag
gatctactatttgctgatcactcaacaatttctcagcacaaggctcggctaatgtttaag
ggaaatgatgatttggagaagtttagacttgatcgcaatgtaacttga
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integrated database retrieval system
