Elaeis guineensis (African oil palm): 105039465
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Entry
105039465 CDS
T03921
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105039465
Transcription machinery [BR:
egu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105039465
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
105039465
NCBI-ProteinID:
XP_010913927
UniProt:
A0A6I9QR19
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Position
2:119669977..119676009
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AA seq
498 aa
AA seq
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MGVVIVPSSASQTPFGAGARFSARRSPAFRRPFFCLAFRTDRAAKCSAAAVSSEAVKPPQ
KPPKRAQATSVDAAPTATQDLDYNEVAAALENIYKLSPAEVSDVEETDQRGRRRRGRSRK
RAKEGDGEEGNVVRNRKRRVRRLSLEKRIALRRRKDEEVEMVAARDERRDLDEDVGKLLR
EYSVSTDLASLDWKKMKIPPVLSSAEHNWLFELMQPMKAIFEVKHNLNKDLNREPTDAEL
AAAVNMTVPQLRRHIEVGRAARNKLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKG
LITAIDRFEAKRGFRLSTYGLFWIRHSIIRSMTISSFTRVPFGIESVRQEIQKAKLELQF
ELGRVPKDEEIIDRVKISPERYYDVMKAAKPIFSLHARHAVTQEEFINGITDIDGVGGDK
RRQRALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHELK
AFMKLKHPARVDYLRRYV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtcatcgtccccagctcggcctcccagactccgttcggcgccggtgcccgc
ttctccgcccgccgatcgccggcttttcggcggccctttttctgcctcgccttcagaacc
gatcgggctgccaagtgctcagccgcggccgtgtcgtcggaggccgtaaagccgcctcag
aagccaccaaagcgagctcaggccacctccgtcgacgccgcccccaccgctacacaggac
ttggactacaacgaggtcgccgccgcgctcgagaacatctacaagctcagcccggcggag
gtttccgatgtggaggagaccgatcagcgcggaaggcggcgccgtggacggtcgaggaaa
agggcaaaagagggggatggggaagagggcaatgtggtgaggaataggaagaggagggtg
aggagattgagtttggagaagaggatagctttgaggaggaggaaggatgaggaggtggag
atggtggccgcgcgggatgaaaggagggatcttgatgaggatgtggggaagcttttgagg
gagtactcggtatcgacagatttggcgagcttggattggaaaaagatgaagattcctccc
gttcttagttctgccgagcataattggctgttcgagttgatgcagcccatgaaagcaatc
tttgaggtgaaacataacttgaacaaggatctgaatagagagcccaccgatgccgagctg
gccgctgcagtcaatatgaccgtgcctcaattaagaagacatatagaagttggtcgagct
gcaaggaacaagctaatcaagcacaatcttcggctagttttatttgtaatcaacaagtat
tatccggagattgcaagtggtcagaagttccaagacctctgccaagctggggtgaagggt
ctcattacagccattgatcgatttgaagcaaagcgcggtttccgtttatccacatatggt
ctattttggatccggcattctataatacgttcgatgaccatttcaagctttacacgagtt
ccctttgggattgaatcggtcagacaagagatccagaaagccaaattagagttgcagttt
gagcttgggagagtgccaaaagatgaagagatcattgacagagtaaaaatttcaccggag
agatattatgatgtcatgaaggccgcaaaaccaatcttttcccttcatgcaaggcatgct
gtaacacaagaagaatttattaatgggatcacagatattgatggcgtgggaggtgataaa
cgtagacaacgtgcacttctacgacttgctctagatgatgtgctagattcactgaagccg
aaggagagcttggtgattagacagagatatgggcttgatggcaaaggtgataggacattg
ggagagattgcaggaaacctcagtatttcgagggagatggtccgaaagcatgaattgaag
gcgtttatgaagctcaaacatccagctcgagttgactatcttcgcagatatgtctga
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