Elaeis guineensis (African oil palm): 105039498
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Entry
105039498 CDS
T03921
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105039498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105039498
03036 Chromosome and associated proteins [BR:
egu03036
]
105039498
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105039498
Coactivators
SAGA/TFTC/STAGA complex
105039498
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105039498
STAGA complex
105039498
TFTC complex
105039498
SAGA complex
105039498
SLIK complex
105039498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
105039498
NCBI-ProteinID:
XP_010913968
UniProt:
A0A6I9QRM0
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All DBs
Position
2:50340321..50351315
Genome browser
AA seq
544 aa
AA seq
DB search
MSIVPKETIEVIAQSIGIANLSPDVALALAPDVEYRLREIMQEAIKCMRHSKRTVLTADD
VDSALSLRNVEPLYGFASGDPLRFKRAVGHKDLFYIDDKDVDLKDVINAPLPKAPLDTGV
VAHWLAIEGVQPAIPENAPVEAIVAPSEIKRSEHSKEDGLPVDIKLPVKHVLSRELQLYF
DKITALIVSRSDSILFKEALESLATDSGLHPLVPYFSYFIADEISRSLNDLPLLFALMRV
VRSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRIADNHWELRDFAANLVASVCRRFGH
VYHNLQYRLTRTLLNAFLDPSKAMTQHYGAIQGLAALGTSVVRVLILPQLETYMQLLEPE
MQLEKQKNEMKRKEAWHVYGALMCAAGKCLYERVKLFPSLLHPPTRQLWRSNGRVATKMP
NKRKASTSHLLQQPPLKKLAADGPVSSIPPISMPTSMQVAADGFPTPSESGIRPSSSTGQ
LSNESISGGSRKERSGGKAPTPSTVLAQAWKEDLDAGHLLASLFELFGEGILSFIQPPEM
SFFL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgttccaaaggagacaatcgaggtcatcgcgcagagcattggcatcgccaac
ctctcccccgatgtcgccctcgccctcgcccccgacgtcgagtaccgcctccgcgagatc
atgcaggaggcgatcaagtgcatgcgccactcgaagcggacggtcttgacggcggatgat
gtggacagcgcactcagtctaaggaacgtggagcctctttatggatttgcatctggggat
cctctgcggtttaaaagggctgtagggcataaggatctattctacattgatgacaaagat
gtggacttaaaggatgtgatcaatgcacctctacctaaagcaccactggatactggagtg
gtggctcactggctagctattgaaggggtgcaacctgcaattccagaaaatgctcctgtg
gaagcaattgtagccccatcagagattaaaagatcggagcacagcaaagaagatggactt
cctgttgatattaaactccctgttaagcatgtattatcaagagaacttcagctgtacttt
gataaaatcacagcgcttattgtaagtaggtcagattcaatcctttttaaagaagcttta
gagagtttagccacagattcggggcttcatccgctagttccatatttttcatacttcatt
gcagatgagatctcccggagtttaaatgatctgccccttttgtttgctttgatgcgtgtt
gtccgaagccttctccggaatccacacattcatattgagccttatttgcatcagttgatg
ccgtcgatgataacatgcattgttgccaaaaggttggggcataggattgcagataaccac
tgggaactaagagactttgctgccaatttagttgcttcagtgtgcagaagatttggtcat
gtgtatcacaatcttcaatatcggttgactagaactcttctcaatgcttttctggatcca
tctaaagcaatgacacaacattatggtgccattcaagggcttgctgcattgggaaccagt
gtggtccgtgttcttattctacctcagctggagacgtatatgcaacttttagagccagag
atgcaactagagaagcagaagaatgagatgaagaggaaagaagcttggcatgtctatggt
gccttaatgtgcgctgctggtaaatgtctgtatgaacgggtcaagttgttcccttctttg
ctgcatcccccaacacgtcaactttggaggagtaatggaagagttgcaactaaaatgcca
aataaacgcaaggcaagtaccagtcacttgctgcagcagccacccctcaaaaaacttgcg
gctgatggcccggtgagttcaatccctcccatttccatgccaaccagcatgcaagtggca
gcagatgggtttccaactccaagcgagtctggcatcaggccatcctcttctacggggcag
ttatccaatgagagcatctctggtggaagcagaaaggaaagaagcggcggcaaagctcca
acgccatccactgtcttggcccaagcttggaaggaggacttggatgcagggcatctcttg
gcatctctattcgagttatttggcgaaggcatattgtcattcattcagccaccagaaatg
tctttctttctgtaa
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