Elaeis guineensis (African oil palm): 105039840
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Entry
105039840 CDS
T03921
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03430
Mismatch repair
egu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105039840
03460 Fanconi anemia pathway
105039840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105039840
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105039840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105039840
NCBI-ProteinID:
XP_073106504
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Position
1:178642919..178662061
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AA seq
942 aa
AA seq
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MRSVFDLHLSMQSEMGGEGDSPVIKAINKAVVHRISSGQVILDLSSAVKELVENSLDAGA
TSIEISLKEYGEEHFKVIDNGCGISPSNFQALALKHHTSKIADFSDLHTLTTFGFRGEAL
SSLCALGKLTVETRTKNEFVGTHLTFDHSGLVTNERKTARQVGTTVTVEKLFSTLPVRSK
EFSRNIRREYGKLVSLLNAYAIIARGIRLLCTNSTSRSSKTVVLKTQGSSSIKDNIITVF
GLNTFQCLEPLSLCISEGCTIEGFLSKPGCGSGRNLGDRQYFYVNGRPVDMPKVSKLVNE
LYRLSNAKQYPIAILNFIIPTTSYDVNVTPDKRKMFFSDEDSLLRSLRAAIEKIYSPHQC
SYSTNKIKEPEKEADIIDSYVFHNDEEPLATPESSKGGGLVEIASCEELVVDDYTQKTPL
VQSQDFHEKLGTVQGGRNSQPKEFTLNACEINKSDSLSAYQYKQSSSSAKSTAKIDGKSA
NHPRIMKSDKISHSNLVQSSLTSFVALSKRKHENRCSVLSEMPVLRNENISCQVRKISSE
MHASVSRSHMCNVQGDNSPEASTETLEEYHVSANISSREEISLSGKYDMCDGGSSGNSGL
QDNPLLAWANSEYSPDKDLEIKSAKLSGDPSELESQYNINDTLKPCSLMTTSSYLQFNIS
DLRRRRQQRLSRLCSNNSSDDGKRIARCYTAATLANSQPENDEGKACSLAAAIVELERFF
RKEDFGRMEVVGQFNLGFIIGKLDDDLFIVDQHAADEKCNFEQLSQSTTLNLQPLLQPMR
LELSPEEEVVASMHMEVIRGNGFVLMEDAHAPPGHRFLLKAVPFSKNITFGAEDVKDLIC
TLADSQEDCSIIGSYKMDTSDSICPSRVRAMLASRACRTSVMIGDPLTRKEMQRILHNLA
DLKSPWNCPHGRPTMRHLADLISIHNARMNRGPNMRIPLPRE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcggtttttgatctccatttgagcatgcaaagtgagatgggaggagaaggtgat
tctccagttattaaggccatcaataaggcagtggttcacaggatttcttcgggtcaagtg
attttggatctttcatctgcggtcaaggagttggtggagaacagtttggatgccggtgcg
accagcattgagataagtctcaaggaatacggtgaagaacatttcaaagttatagataat
ggctgcggcatctcacccagtaattttcaggcccttgctcttaagcatcatacatccaaa
atagcagatttttctgatcttcacactttgacaacatttggcttcagaggagaggcacta
agttccctttgtgcattggggaagttgactgtggaaacaagaacaaaaaatgagtttgtt
ggcacacatttgacatttgatcattcaggtttagtaacaaatgaaaggaaaactgcacgc
caagttggcaccactgtgactgttgagaaattattctccactttgcctgtgcgaagtaag
gaatttagtcgcaacattcggcgagaatatggaaagcttgtttctttactaaatgcgtat
gctataattgcaagaggaatccgattactttgcacgaactcaactagcagaagttcaaaa
actgtggtgcttaaaactcaaggaagcagttcaataaaagataatatcataactgtcttt
ggtttaaacaccttccagtgcttagagcctttgagtttatgcatatctgaaggctgcacc
atcgagggctttctttccaagccaggatgtggcagtggtcgtaatttgggagacaggcag
tatttttatgtaaatgggagacctgttgatatgccaaaggtcagcaaacttgtaaatgaa
ttatatagactctcaaatgccaagcaatatcccattgcaatcttgaattttattatacca
actacgtcttatgatgttaatgtaactcctgataagaggaaaatgtttttttctgatgag
gactcccttttacgttctttacgagcagctatagaaaagatatattctcctcatcagtgc
agttattctaccaacaagattaaggagcctgagaaagaggcagatatcattgactcatat
gtttttcataatgatgaggagcccttggcaacacctgaatcttctaaaggtggtgggctt
gtggaaatcgcgtcttgtgaggaattggttgtggatgattatacacaaaagacaccgcta
gtgcagagtcaggacttccatgagaaattgggaactgttcaaggtggcagaaactctcaa
ccaaaggaatttactcttaatgcctgtgagatcaacaaatctgatagtctttctgcctac
cagtataagcagtctagtagctctgccaaatcaactgcaaaaattgatggaaagagtgca
aatcacccaagaataatgaagagcgacaaaatttctcattcaaatcttgtacaatcttct
cttacaagctttgtggctctaagtaagaggaagcatgaaaatagatgcagtgtgttgtct
gaaatgcctgttctgagaaacgaaaatatttcctgtcaagtcagaaaaataagttcagaa
atgcatgcttcagtctcaagatcccatatgtgtaatgttcaaggggataattctcctgaa
gccagcacagaaacattagaggagtaccatgtatcagcgaatatctccagcagagaggag
atttccctttctggtaaatatgatatgtgtgacggaggatctagcgggaattcaggatta
caggataatccattgcttgcttgggcaaactcggaatattcacctgacaaagatttggaa
ataaagtcagcaaaactctcaggcgatccttcagagcttgaatcacaatacaatattaat
gacactttaaaaccttgttccctcatgactacatcttcatatttgcaatttaatatcagt
gatcttagaagaagaaggcaacagaggctctcaagattatgttcaaacaattcatcagat
gatggaaaaaggattgcaaggtgttataccgctgcaacacttgcgaattctcaaccagaa
aatgatgagggaaaagcatgctctttagcggcagctattgttgagttggagagatttttc
agaaaagaagattttggacgtatggaggttgttgggcagttcaatcttggatttattatt
ggaaagttagatgatgacttatttattgtagatcagcatgctgcagatgaaaaatgtaat
ttcgagcaactctcacaatcaaccaccttgaacctacagcccctacttcagccaatgagg
ttggaattatcaccagaagaggaagtagtagcttctatgcacatggaagtaatcagggga
aatggttttgtgttgatggaggatgctcatgccccacctggccatcgatttctactgaag
gctgtgccattcagtaaaaacataacatttggagctgaagacgtgaaggatcttatttgt
acccttgctgatagtcaagaagattgctcgataattggcagttacaaaatggacacttct
gattctatatgtccatcaagagtccgtgctatgttggcttcacgggcttgccggacatct
gttatgattggtgatccactgacaagaaaagagatgcagcggatacttcataatttggcg
gacctcaagtccccctggaattgtccacatggtaggccaaccatgcgtcaccttgcagac
ttgatcagtattcacaatgcaaggatgaacagaggacctaatatgagaatccctctccca
cgggagtag
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