Elaeis guineensis (African oil palm): 105039942
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Entry
105039942 CDS
T03921
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105039942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105039942
03016 Transfer RNA biogenesis [BR:
egu03016
]
105039942
03029 Mitochondrial biogenesis [BR:
egu03029
]
105039942
Enzymes [BR:
egu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
105039942
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
105039942
Transfer RNA biogenesis [BR:
egu03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
105039942
Mitochondrial biogenesis [BR:
egu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
105039942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
105039942
NCBI-ProteinID:
XP_010914572
UniProt:
A0A6I9QT35
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Position
1:complement(180946161..180963417)
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AA seq
856 aa
AA seq
DB search
MAPERGNPVPTSSSAPPAPPRILNVQKFAKSRAPELESLHAIVSNRLGHDFRIQRSKRRR
TTGHKVTRNRRVKQRKVGDGDGGVQEGTSAEDDRKNVSRRTRRRFEFQKNPASGFCTTGD
GTRRLRTHLWHAKRFAMVKQWGFYLPLGLHGRGRGSRANLKWLKYGALVHDASYSLPIQL
EGPEDSILAILRMVLLPSPLGPTDVSEKLSQMVTHGVCYENAMLYHVENPLSHFIAPVIY
MWRPFLSDDNRNSVQQDDVSNGCCKSGKNGSGTSPRQLWIWIHAAAFNEGFNTLRFACQK
QMHESGKSVSCFTLEGHIARLEIIGSEAIQVLQKTLHPITESCSTSDHSSTDFQLQKACI
LNLAEHLPLHAILSLTVHDPRDFPSKVEPASEAHTKLESDLQEEDIKNSSLWVSRQSSKN
EDKLLSLWSEPENSGIFLSDSKSLWDASDKMSPPIPEHVLCTEKHYTRLKFFHFDPTNCR
MPATEAKDGFSRSCSVLLLKHAKQGWSIILPLSWIKPFWMSLILHGAHAMGLRERRWIAC
NNGLPSFPFDFPDCKAYMLFMANEASAFDRAAELRPLAVRPVKVPVPPPWDCIMSTVKNG
PYILKGFQTPDVQGSGGAAPECSLVNLASQNVETLDQATASFQGFIPRAPKILKEYLEKI
CDGQFPLFPSMAMVEKDFSDLTDRNAFNWVTRSDHQMLADKELCLVRILLHAYKEGVFEE
GAVVCAPILTDLSQWTSRSEEQEQPTVTQSFVRSCFTQQDSGKWKLQVPEDPSAQQSFRW
PIGFVTSGFVYGSGKPVAIAFCEAKLLAMLRAQQWNQTQETRPEIFVWVRNMRSTAYRRA
VATILLEQQKEDLEFL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagagagaggcaaccccgttccgacctcctcctctgccccacccgctcctcct
cgaatcctaaacgttcagaaattcgcgaaatcgcgagctcccgagctcgaatccctccac
gcgatcgtctccaaccggctgggccacgatttccggatccaaaggagcaagaggcggcga
acgaccggccacaaggtcaccaggaaccggcgcgtgaagcagcgaaaggtgggggacggg
gacggtggcgtgcaggagggcacgagtgcggaggatgatcggaagaatgtgtcccggagg
actcgccggagatttgagttccagaagaatccggcgtcggggttctgtaccacgggggac
gggacgaggaggctcaggactcacttgtggcacgcgaagcggttcgccatggtcaagcag
tggggtttttatctccctctagggcttcatggaagagggagaggttcaagggccaacttg
aagtggttaaaatatggggcacttgtacatgatgcatcctacagccttccgatccaacta
gaggggccagaggattcaatactggctattttgagaatggttctactgccatcaccttta
ggacccacagatgtttcagaaaaactttcacagatggtaactcatggagtatgctatgaa
aatgctatgctttatcatgtggaaaatcctctttcccattttattgctcctgtgatttat
atgtggcgaccgttcttaagtgatgataatcgtaatagtgttcaacaagatgatgtttca
aatggctgttgcaaatctggtaaaaatggaagcggtacatcacccagacagttatggata
tggatacatgctgcagcttttaacgaaggattcaatacactgagatttgcatgtcaaaaa
cagatgcatgaatctggcaaatctgttagttgttttactcttgaggggcacatagcaagg
ttggaaattataggttctgaagcaatacaagttcttcagaagacattgcatcctataaca
gagtcatgcagtacttctgatcattctagcactgactttcagcttcagaaagcctgcatc
cttaatctagcagagcaccttccattgcatgcaattctatctctgacagttcatgatccc
agggattttccatccaaggttgagcctgcctctgaagctcatactaaactggagagtgat
ttgcaagaagaagatattaaaaattctagtctttgggtctctcggcaatcatccaagaat
gaagataaattgttgtcactgtggtcagaacctgaaaacagtggcatttttctttctgac
agtaaaagtttatgggatgccagtgataagatgagtcctccaattccagaacatgtactt
tgcacagagaagcattatacacgtttgaaattctttcactttgatcctaccaattgcaga
atgccagctactgaagcaaaagatggttttagtcgatcttgctctgtgttgcttctaaaa
catgctaaacagggatggtcaatcattctacctttaagttggataaagcctttctggatg
tctctcatcctacatggggctcatgcgatgggcttaagggaaaggcggtggattgcatgc
aataatggcctaccatccttcccatttgattttcctgattgcaaagcttacatgttgttc
atggccaatgaagccagcgcatttgatcgagcagctgaactccgtcctcttgcagttaga
cctgtaaaagtcccggtgccacctccttgggattgtataatgtccaccgttaagaatgga
ccctatatattaaaaggttttcaaacaccagatgttcaaggctctggtggagcagctcct
gaatgttctttggtaaatttagcctcccaaaatgttgaaacattagaccaagctactgca
tccttccaaggctttataccaagagcacccaaaattttgaaggagtatttagaaaagatc
tgtgatgggcagttccctttatttcctagcatggcaatggtggaaaaggacttctctgac
ctgactgatagaaacgcattcaattgggtcactagaagtgatcaccaaatgcttgctgac
aaagaactgtgtcttgtaagaattttgcttcatgcatacaaggaaggtgtttttgaagaa
ggtgccgttgtttgcgcgcccattctgaccgacctatcacaatggacgtccaggtcagag
gaacaggaacaaccaacggttacccagtccttcgtaagatcatgttttacacagcaggat
tctgggaagtggaagctgcaggtgcctgaagatccttccgcccagcagtcatttaggtgg
ccgatcggttttgtaacatctgggtttgtttatggaagtggcaagccagtggcgatagct
ttctgtgaagcaaagcttcttgctatgttgagagcacaacaatggaatcagacacaggaa
acaagaccggaaatctttgtctgggtccgtaatatgagatccactgcttaccgacgtgcc
gtggccacgatccttctggaacaacagaaggaagatctggagtttttgtaa
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