Elaeis guineensis (African oil palm): 105040286
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Entry
105040286 CDS
T03921
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105040286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105040286
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105040286
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
105040286
NCBI-ProteinID:
XP_010915052
UniProt:
A0A6I9QTJ6
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Position
3:125407619..125435405
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AA seq
1101 aa
AA seq
DB search
MQRQKSILSFLHKPSPENQRTGGPTSYADTLGRRSAANQDPRRSSSVAEKPLKEPSPEIQ
GTDTPPEKPRRPIFPAGVPATDDDHKNATRSFSSIMHKFTREGRSESSSKGNQDDSGSLG
SHFKSDTLEEDHGYVKKETRSLEHAKYHYLVSKDDSKGMEPLHFELHSDVLGPETPATRP
LVPRLKRVQEDPCDSENKYDSLLLSSSKRLKSIQDSVIEQKTRGEVHESLTSKFEWLNPS
AIRDANRRRPSDPLYDKRTLYLPPDALKKMSASQKQYWSVKCQYMDVVLFFKVGKFYELY
ELDAEIGQRELDWKMTMSGVGKCRQVGISEAGIDDAVQKLIARGYKVGRMEQLETSDQAK
ARGSASVIQRKLVEVSTPSTITDGSMGPDAVHLLALKEGKQSSANGSTIYGFAFLDYAAL
KFWVGSVSDDDSHAALGALLMQVLPREVIYESSGLSEETHRALTKYASAGSTKVQMTPVM
PGTDSLDASKVRKLIHSKGYFRGSSNSWSLAFDCLMNHDLIICALGELVGHLSRLMLDDA
LRNGELLPYHVYKSCLRMDGQTLTNLEIFSNNVDGGPSGTLYKYLDHCITASGKRLLRRW
ICHPLKNIDDIKDRLNIVEGLIKDSGVTYIIAEYLHRLPDLERLLGRVKATVGSSSMLLL
PLVGERVLKQRIKAFGSLVKSLRVGINLLSVLQKKNHEISSLSKIVNLPMLSVLDELLHQ
YEVALDDDFPQYQDHDVKDSDAETLGVLVELFVGKATEWSQVINALNCIDVLQSFAQAAF
QSHGSMSRPVFLPASSDYIDSHRESEGPTLQMKGLWHPYAVAENEDGLVPNDIYLGQDSD
GHHPCALLLTGPNMGGKSTLLRATCLAVILAQLGCYVPCEMCALSPADVIFTRLGATDRI
MSGESTFFVECAETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVERVRCRL
LFATHYHPLTKEFASHPHVSLQHMACAFKARAGCSFDRDGDLVFLYRLASGACPESYGLQ
VALMAGIPKQVVETASKASQRMKLMIGENFKSSEGRSKFSTLHEEWLKTLLSISGINNDC
WDDDASDTLLCLWHELKGFYR
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaagtccattctctcattccttcacaagccctcgccggaaaaccagcgg
accggcggccctacttcgtatgccgacacgctcggccgccggtcggcggcaaatcaagac
cctcggcggagctcctccgtagcggagaagcccttgaaagaaccctcgccggagatccaa
ggaacagacactccgccggagaagccgcgccgcccgatcttcccggcgggagttccggcg
accgacgatgaccacaagaacgcaacccggtcattctcgagcatcatgcataaattcacc
agggaaggcagatcggaaagcagcagtaaggggaaccaagatgacagtggttcccttggc
tctcattttaaatctgatacccttgaagaagatcatggatatgtgaaaaaagaaacacgg
tcccttgagcatgcaaaatatcattacttagtgtctaaagatgactccaaagggatggag
cctctgcattttgaactgcactcagatgtcttggggccagaaacccctgccacccggcca
cttgttcctcgtttaaagcgggtacaggaggatccttgtgatagtgaaaataaatatgat
tctctccttttgtcttctagcaaaaggttgaaatcaattcaagattctgtgattgaacaa
aagactcgtggtgaagtacatgaaagtctgactagcaagtttgagtggctcaatccttct
gctattagagatgcaaatagaagacggccaagtgatccactttatgacaagagaacactg
taccttccacctgatgcattaaagaaaatgtcagcatctcaaaagcagtattggagtgtg
aaatgccaatacatggatgttgtcctcttcttcaaagttgggaagttttatgagctgtat
gagttagatgctgagattggccagagggagcttgactggaaaatgactatgagtggtgta
ggtaaatgcagacaggttggcatttctgaggctgggattgatgatgctgttcagaagctt
attgctcgggggtataaagttggacgaatggagcaacttgagacctccgaccaagccaaa
gctagagggagtgcttctgttatccaaagaaaattagttgaggtttcaacaccatccact
ataactgatggcagcatgggaccagatgctgttcaccttcttgccttgaaagagggaaag
caaagttcagcgaatggttccaccatatatgggtttgcttttctggattatgctgccttg
aagttctgggtgggttctgtatctgatgatgattctcatgcagctttgggtgctttgctg
atgcaagttttaccaagggaagttatctatgaaagctcaggactctctgaagaaactcac
agggcattgacaaaatatgcttcagcaggttccactaaagtgcaaatgactcctgtaatg
cctggcacagactctctggatgcttccaaagttagaaaattgatacattctaaaggatat
ttcaggggatcttctaattcatggtctttggcatttgattgtttgatgaaccatgatctc
attatttgtgctcttggtgaacttgttggtcatttatctaggctaatgctagatgatgct
ctacgtaatggggaacttttgccttatcatgtatataaaagttgcctaagaatggatggc
cagaccctcacgaatcttgagatcttcagcaataatgttgatggtggcccgtcaggcaca
ttatataaatatcttgatcactgcataactgcatctggtaaacggcttttaagaaggtgg
atatgccatccactaaagaatattgatgatatcaaggataggcttaatattgtggaggga
ttaataaaggattcaggggtaacctacataatagctgagtatctgcacaggcttcctgat
cttgagagactgttaggacgggttaaggctactgttggttcatcatctatgctccttttg
cctttggttggagaaagagtactgaaacaacggatcaaagcatttgggtctcttgtcaaa
agtctccgagttggaataaatttgttaagtgttctacagaaaaagaaccatgaaatctca
tcattgtcaaaaattgtgaatcttccaatgctcagtgtgcttgatgaactgcttcaccag
tatgaagtagctctggatgatgattttccacagtatcaggatcatgatgtgaaggactcg
gatgctgaaacattaggtgttctagttgagctgtttgttggaaaggctactgagtggtca
caggtcatcaatgcactgaactgtattgatgtgctccaatcatttgctcaagctgcattt
caatcgcatggttccatgagtaggcctgtatttctgccagctagttcagattacatagat
tcacaccgagaaagtgaaggaccaacactgcaaatgaagggtttatggcatccctatgct
gttgcagaaaatgaagatggtctagttcccaatgacatttatcttggtcaagactcagat
ggacaccatccttgtgcactgttgttgactggaccaaatatgggtggaaaatcaacatta
cttcgtgcgacatgtctggctgttatactggctcagctgggttgctatgttccctgtgaa
atgtgcgcattatcacctgctgatgttatctttacacggctgggtgcaaccgatcgcatc
atgtcaggcgaaagtaccttctttgttgaatgtgcagaaacagcatcagttcttcaaaat
gccactcaagattctcttgtcttgcttgacgaacttggtagaggaacaagcacttttgat
ggatatgcaattgcctatgctgtatttcgacatcttgtggaaagggttcgctgtcgtttg
ctttttgccacgcactaccatccccttacaaaggaatttgcatctcatcctcatgtaagc
ttgcaacacatggcttgtgcattcaaggctagagctggatgctccttcgatagggatgga
gacctggtatttctctaccggcttgcttcaggagcttgtccagagagctatggattacaa
gtcgctttgatggcagggattccaaaacaagttgttgaaactgcatcaaaggctagtcaa
agaatgaaattgatgattggtgaaaatttcaaatccagtgaaggaagatctaaattttcc
accctccatgaagagtggttaaagaccctgttgtccatctctgggattaataatgattgt
tgggatgatgatgcatctgatacattgctttgtttgtggcatgaactcaagggtttctac
agatag
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integrated database retrieval system
