Elaeis guineensis (African oil palm): 105040322
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Entry
105040322 CDS
T03921
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egu03000
]
105040322
03036 Chromosome and associated proteins [BR:
egu03036
]
105040322
Transcription factors [BR:
egu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105040322
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105040322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
DUF6209
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
105040322
NCBI-ProteinID:
XP_073110934
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Position
3:complement(124526619..124550881)
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AA seq
649 aa
AA seq
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MTDGHLFNNILLGGRGGTNPGQLRVHAGGIAWRKQGGGKIIEVDKADIASLTWMKVPRAY
QLGVRIKDGLFYKFIGFREQDVANMTNFIQKSIGITPEEKQLSVSGHNWGGVDINGNMLT
FSVGSKQAFEVSLADVAQTQLQGKTDVYLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDENRPPAQVLLEKIMSLADISSSEEAVVTFEGIAILTPRGRYSVELHFSFLRLQGQAND
FKIQYSSVIRLFLLPKAGQTHTFAVITLDPPIRKGQTLYPHIVIQFEAEAAVEGRLSLSE
DLLATRYKDKLEASYKGLTSDVFIWVLRGLSGAKVTRVSSFRSCQGGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHDEIEYVEFERHGAGGSSVSSHYFDLLVKLKNDQEHLFRNI
QRTEYHSLFDFISGKGLKIMNLGDVQTTNGVAAVLQNADDDAVDPHLERIKNEAGGEESD
EEDEDFVADKDDGGSPTDDSEEEESDASERGDDKERPAAKDSKKEAAGTKASSTKRKPKD
GDEEGSKKRRQKKKKDPNAPKRALSGFMFFSNAERENVKKSNPGMSFTDVGRTLGERWKK
MSAEEKEPFEAMARADAKRYKEAMAGYKSGGPASTGGPASTVDSGDETE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccatctcttcaacaacatccttctcggaggacgcggcggaaccaaccca
gggcagttgagggtacatgcaggcgggattgcatggaggaagcaaggtggtggaaaaatt
atcgaagtagacaaagcagatattgcttcgctgacctggatgaaagttcccagggcgtat
cagcttggggtgagaatcaaggatggcttgttttacaagttcattggcttccgtgaacag
gatgtcgctaacatgacaaattttattcaaaaatctattggaataacaccagaagagaag
cagctttctgtcagtggccataattggggaggtgttgatatcaatggaaacatgcttaca
ttctcggtaggttcaaagcaagcatttgaggtttcactggcagatgttgcacagactcag
ctgcaaggaaaaacagatgtttacttggagttccacgttgatgacactactggggctaat
gagaaagattcgttgatggatttaagttttcatgtacctacttctaatactcagtttgtt
ggtgatgaaaatcgtcctccagctcaggttttactagaaaaaatcatgtcattggcggat
attagttcatcagaagaagctgttgtcacatttgaaggaattgcaattcttacacctaga
gggaggtacagtgttgagcttcacttttcattcttgcgactgcaaggacaggctaatgat
tttaagattcagtatagcagtgttattcggcttttcctgttgccaaaggcaggtcaaact
catacttttgctgtaatcacacttgacccgccgattcgcaaaggacaaactttataccca
catattgttattcagtttgaagcagaagctgctgttgaagggcgcctgtctctaagcgag
gatctcttagctacaagatacaaggacaaactagaagcatcatataagggtctaactagt
gatgtcttcatttgggtcttgcgtggtttatctggtgccaaagtgacaagagtcagttca
ttccgcagttgtcaaggtgggtatgcagtcaagtcatcattgaaagccgaagatggattg
ttgtaccctcttgagaagggattcttctttctaccgaagcctccaactctcattcttcat
gatgagattgagtatgttgagtttgaaaggcatggtgctgggggctcaagcgtgtcatct
cactattttgatctccttgtaaagcttaaaaatgatcaagaacacctgtttagaaatatc
cagaggactgaatatcacagcctttttgacttcattagtggaaagggtttgaagattatg
aaccttggagatgtgcaaaccacaaatggtgttgcagctgtgcttcagaatgctgatgat
gatgctgttgatccacatctagagcgaataaagaatgaggctggtggtgaagaaagtgat
gaagaggatgaggattttgttgctgataaggatgatggtgggtctcctactgatgattct
gaagaagaggagtctgatgctagcgagaggggagatgataaagaaagacctgctgccaag
gattcaaaaaaggaagctgctggtactaaggcatcatctactaagaggaaacctaaggat
ggggatgaagaaggctcaaagaagagaaggcagaagaagaaaaaagatcctaacgcacca
aaaagggcattgtcagggttcatgtttttttcaaatgctgaaagagagaatgtaaagaaa
agcaatcctggaatgtcatttacagatgttgggagaactcttggggaaaggtggaaaaag
atgtcagctgaggaaaaggagccattcgaggcaatggcacgggcggatgctaaacgttac
aaggaggccatggctggctataagagcggtggtcctgcaagcactggtggtcctgcaagc
actgtagattcaggtgatgagactgaataa
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