Elaeis guineensis (African oil palm): 105040903
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Entry
105040903 CDS
T03921
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105040903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105040903
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
105040903
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
HSBP1
Motif
Other DBs
NCBI-GeneID:
105040903
NCBI-ProteinID:
XP_010915956
UniProt:
A0A6I9QVT1
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Position
3:111568874..111572804
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AA seq
661 aa
AA seq
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MGRESEAEAGTRAVARLIEKATNSTAGEVDPRLLKAIKSTVRSSSDEIHAAVDSLMDHMK
KQHAQVRFLAVLIVDELFMRSKLFRSVLVVNLDQFLSLSIGFRRDLPLPPPSSIASHLRS
KSIELLEKWNASFGIHYRQLRLGFNYLKNTLRYQFPNRLENATRLQQERQEREMRSKQIL
LDKFENLKDKFSSIQAEIQSTIDEIEECLEILSVKQEEFTPNLSTEDDEVEEFKSLTLQQ
IRLDSLKEGEKVKEDSDNKVIFDALRESLKLLISKHLSSVQEWISVLVRVDLTDNKFRDN
ALKEFIDIRNLIHSVRARCGQLGCFLDNPSDLKKDEDDDDLWEEGKIEHYMPATSSVPNS
SVGNSADTATSSKGKDVALPDANKSSIGHVLSSTSERSRLLVEAPVVTWGPFLDNWGPNQ
DVLANHRGLELQAHWGRVDYDAVIPAEKIAELNFHRTVYKEEPVELPPCRAPLKKGGLCQ
RRDLRVCPFHGPIVARDDEGNPIDQNSQGDRETEKEYPTAATDLRSDSVDAHGTLNLGKE
MVEKLGRQAVKNVRERERDMKSMKRAKLAKIREHNEDVLREAAIASTSYSEAFAEHPATS
VRNGAEVKVKKPTLASMLKKKITAKDRLAQRLLNSRVTDSASRQLMQGEDSKYREAFPNQ
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggggagggagagcgaggcggaggcagggacgagggcggtggcgaggctaattgagaag
gccaccaattcgacggccggcgaggtggacccgcgcctcctcaaggccatcaaatccacc
gtccggtcctcctccgacgagatccacgccgctgttgactccctcatggaccatatgaag
aagcaacacgcccaggtgcgattcctagctgttcttatagttgatgaattgttcatgcgt
tcaaagctgttcaggtccgtccttgtagtcaatttggatcagttcctgagcttaagcatt
ggtttcaggagagacctgcctcttcctcctccttcttccattgcatcccatctgcgctca
aagagcatagaactgttggagaaatggaatgcctcttttggaattcactacaggcagctt
agattgggtttcaattacctgaagaacaccctcagataccagtttcctaatcggttggag
aatgccactcggttgcaacaagagagacaggaacgagagatgaggtcaaagcagattttg
ctcgataaatttgaaaatcttaaggacaagttttcctccatccaggctgaaattcagtca
acgattgatgaaatagaagagtgcttagaaattcttagtgttaaacaagaagaatttact
ccgaatctgtccactgaggatgatgaggtggaagaatttaaatctcttacattgcagcaa
atccgtcttgactccttgaaggagggagagaaagtcaaggaagacagtgataacaaagtt
atctttgatgccctcagagaatcacttaagcttttaatctcaaagcatttgtcatcagtg
caggaatggatttctgttcttgtcagggttgatctcactgacaacaaattcagggataat
gcattaaaggagttcatcgatatccgcaatcttatccattccgtcagggcacgctgtggt
cagttaggctgttttcttgacaatccctctgacctcaaaaaggatgaggatgatgatgat
ttgtgggaagagggaaagatagaacattacatgcctgcgacttctagtgtacctaacagt
tcagttgggaattctgcagatactgcaacaagcagcaagggaaaggatgtagcactccct
gatgcaaacaagtcatcaattgggcatgttttgagctcaacttctgagaggtcaagacta
ttggtggaagctcctgtagtgacatggggtccattcttggacaactggggtccaaaccaa
gatgttttagctaatcataggggtctggagctccaggctcactggggtagggtggattat
gatgctgtcattcctgcagagaagatcgcagagctgaattttcatcgaacagtttataag
gaggaacctgttgaacttccaccttgccgggctcctttgaagaaagggggactttgtcag
agaagggatttgagggtgtgcccgtttcatgggcccatcgtagcacgcgacgacgaggga
aatccaatagatcaaaattcacagggtgatagggaaactgaaaaagagtatcctacagca
gcaacggacctaagaagtgattcggtagatgcccatggaactctcaatctgggaaaagaa
atggttgagaaattggggagacaagcagtcaaaaatgtacgggaaagagagagggatatg
aagtcaatgaagcgagcgaagctggcaaaaattcgtgaacacaatgaagatgttttgcgg
gaagctgcaattgcttcaacttcatactcagaagcttttgcagaacatccagcaacatca
gttcgaaatggagctgaagtcaaggttaagaagccgacattggcatcgatgctgaaaaag
aaaataactgcaaaggatagattagctcaaaggcttttaaatagtcgtgtaaccgattct
gcaagtagacagctaatgcagggggaggattcaaaataccgagaagctttcccaaatcaa
tggtag
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