Elaeis guineensis (African oil palm): 105041073
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Entry
105041073 CDS
T03921
Name
(RefSeq) ubiquitin receptor RAD23c isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03420
Nucleotide excision repair
egu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105041073
09124 Replication and repair
03420 Nucleotide excision repair
105041073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
egu03051
]
105041073
03400 DNA repair and recombination proteins [BR:
egu03400
]
105041073
Proteasome [BR:
egu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105041073
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105041073
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_Ucp12
Rad60-SLD_2
Dsc3_N
UBA_RAD5A
TECR_N
CUE
Ubiquitin_4
Crinkler
UBA_3
Phasin_2
USA1_Ub-like
Motif
Other DBs
NCBI-GeneID:
105041073
NCBI-ProteinID:
XP_010916168
UniProt:
A0A6I9R0W5
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All DBs
Position
3:108067974..108084507
Genome browser
AA seq
384 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDTVADVKRNIEATQGQSVYPAEQQMLIYQGKILKDETTLQ
DSKVAENSFVVIMLSKTKGSSSGASTAGTTPTSQAPAAGSVRPDAPTPAPTPTTAPTATL
APVPTTTATPTTTATPASAVTASGDVYGQAASNLVAGSGLEQTIQHILDMGGGTWERDIV
VRALRAAYNNPERAVEYLYSGIPEQAEAPPVARAPASPPVQSPQATQPAVPSSGPNANPL
DLFPQGLPSMGSNASAGSLDFLRNSPQFRALQTLVQANPQILQPMLQELGKQNPQVMRLI
QEHQAEFLRLLNEPAEGAESDLLGQFASPMPQALTVTPEEREAIERLEAMGFDRALVLEV
FFACNKNEELAANYLLDHMHEFED
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtcaagacgctcaagggcacccatttcgagatcgaagtgaagcccgaa
gacaccgttgctgatgtcaaaaggaatatagaggccacacaagggcaaagcgtttaccca
gctgaacaacaaatgctgatatatcaagggaaaattctcaaagatgaaacaacgttgcag
gacagtaaagttgctgagaatagttttgttgttataatgctgagtaagactaaaggttcg
tcaagtggagcttcaactgcaggcacaacacctacaagtcaggcccctgctgctggttct
gtgagaccagatgccccaactccagcacccaccccaactacagcacccactgcaactttg
gccccggtccccacaactacagctactccaactaccacagctacaccagcttctgcagta
actgcatccggtgatgtttatggtcaagcagcatccaatcttgtcgcaggcagtggcctt
gagcaaaccatccaacacattcttgacatgggtggaggcacttgggagagggacattgtt
gttcgtgctttacgtgctgcatataacaaccctgagagagctgttgagtacttatattca
ggtattcctgagcaagcagaagcaccacctgtggcccgagctccagcgagccctccagtc
caatctccccaggcaacccagccagcagttccttcaagtggaccaaatgctaatcctttg
gacctcttccctcagggtctccccagcatgggttccaatgctagtgcaggcagccttgat
tttcttcgcaacagtccacagtttcgagccttgcagactttggtgcaggcaaatccccaa
atattacagccaatgcttcaagagctagggaaacaaaacccccaagttatgaggctcatt
caggagcatcaagctgaatttcttcgtttactcaatgaaccagctgagggagctgagagt
gatctactaggacaattcgcaagtccaatgccacaagcattgacagttactcctgaggaa
cgcgaggccattgaacgtcttgaggcgatgggctttgatcgggctctcgtattagaggtc
ttctttgcctgcaataagaatgaggaattggctgcaaactatcttttggaccacatgcat
gagtttgaagactga
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