Elaeis guineensis (African oil palm): 105041374
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Entry
105041374 CDS
T03921
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105041374
03036 Chromosome and associated proteins [BR:
egu03036
]
105041374
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105041374
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105041374
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105041374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
105041374
NCBI-ProteinID:
XP_010916633
UniProt:
A0A6I9QWT4
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All DBs
Position
3:complement(102021548..102029416)
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AA seq
604 aa
AA seq
DB search
MALLFFPLPSSTVFIPLRRNSEPSSLHSISFPISISRNPSAASSRKPLLSARAAMRLAEE
TSRADAASTLDISKLGISEQIVSALSRRGITELFPIQRAVLEPAMEGRDMVGRAITGSGK
TLAFGIPILDNIIRHQSQHRRNQVPSALILAPTRELARQVQREFKASAPSLSSTCLYGGI
PIMNQVRSLRFGMDVVVGTPGRIIDLVQRGALDLSEVKFVVLDEADQMLAIGFQEDVECI
LSYLPARKQCMLFSATMPSWVNVLSRKYLNDPLVIDLVGDSDQKLAEGISLYSIATTAPN
KHNLLPTLISRYAQEGKSIIFTKTKKDAESLSRSMTRIIGSRALHGNMQQFQRDKTLAAF
RDGQFNVLVATDVAARGLDIPNVDLVIHFEMPNTSEVFLHRSGRTGRAGKKGTAVLIFTR
SQQQAVRTIERDLGCKFEQLHGITDGVGSRIEYSDGEGSLYDKHDSVEEKFRHRDHFSDR
RYGKYGRYQVSNPSFRGYEGSRKNYFSGQSDSPHARQAQTRRKQFLEYDDFQNDHGNGRI
TGRESLQWPSRTARPNAYHEAKSNSSGRTYKGYNKNKSRNKRPFKSASTNENFDQIVDLF
KDLY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctctcctcttcttccctctcccctcctccactgtcttcatccctctcagaagaaac
tccgaaccctcctctctccactccatctcctttcccatctccatctctagaaaccctagt
gctgcctcttctcgaaagccgctcctttccgctcgcgcggcgatgcggctcgccgaggag
acgagcagggctgatgccgcctccaccctcgatatctcgaagctcggcatctctgaacag
atcgtctccgctctctctcgtcggggaattaccgagctctttcccattcagagagctgtc
ttggagccagctatggaaggtcgagatatggttggaagagctattactggttcagggaaa
accttagccttcggcattcccatattggataatattattcgacatcagagtcaacacagg
agaaatcaagtcccttctgctctaatattagcacctacacgtgaacttgcacgtcaggtg
caacgggagtttaaagcatctgctccaagcttgagcagcacatgtctctatggaggaata
ccaatcatgaaccaggtgcgatctctaagatttggcatggatgttgttgttgggacacct
ggaagaattatcgacttagttcaaaggggtgccttagatctctcagaagtcaagtttgtt
gtgttggatgaggctgatcagatgttggctattggatttcaagaggatgtcgaatgcatt
ttaagttatttacctgcaaggaagcaatgtatgctgttctcagcaacaatgccttcgtgg
gttaatgttctctcaagaaagtacctgaatgatcctttagtaattgatctggttggtgac
tctgatcagaagttagctgagggcatttctctctattctattgcaacaactgctcctaat
aagcataatcttctgccaactttgatctctaggtatgcacaagaaggtaaaagtataatt
tttacaaagacaaagaaggatgctgaatcactttcaaggtccatgacaagaatcattgga
agcagagcattgcatgggaacatgcagcaatttcaaagggataaaactcttgctgctttc
cgtgatggacagtttaatgtgctggttgctactgatgttgctgcacgtggtcttgatatc
ccaaatgttgacttggttattcattttgaaatgccaaatacttcagaggtcttccttcat
agatctggtcggactggtcgtgctggaaaaaaggggactgcagttcttattttcactcga
agccagcagcaggcagtcagaactattgagcgggatctaggctgcaaatttgaacagttg
catggaatcaccgatggtgttggtagcagaatagaatattcagatggggaagggagcctt
tatgacaagcatgattcagtagaggagaagtttcggcatcgagatcatttttctgaccgc
cggtatggaaagtatggaagatatcaagtatccaatccatcatttagaggttatgaaggc
tctagaaagaactatttttctggtcagtctgattccccgcatgctcgtcaagctcaaacc
agaagaaagcaatttctcgagtatgatgactttcaaaatgaccatgggaatggaaggatc
acaggtcgagaaagtttgcagtggccctcaaggactgcacgtccaaatgcttaccatgag
gcaaaatcaaattcctcaggcaggacctataaaggctataataagaataagagcagaaat
aaacgaccattcaaatctgcaagcaccaatgaaaattttgatcagatagttgatttgttc
aaggacctctattaa
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