Elaeis guineensis (African oil palm): 105042420
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Entry
105042420 CDS
T03921
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03030
DNA replication
egu03410
Base excision repair
egu03420
Nucleotide excision repair
egu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105042420
03410 Base excision repair
105042420
03420 Nucleotide excision repair
105042420
03430 Mismatch repair
105042420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egu03032
]
105042420
03400 DNA repair and recombination proteins [BR:
egu03400
]
105042420
DNA replication proteins [BR:
egu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105042420
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105042420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
PTCB-BRCT
AAA_22
Rad17
AAA_30
Gp44_lid
BRCT_2
RsgA_GTPase
AAA_19
Zeta_toxin
AAA_5
AAA_assoc_2
nSTAND3
Sigma54_activ_2
RuvB_N
AAA_16
AAA_18
DNAX_ATPase_lid
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
105042420
NCBI-ProteinID:
XP_010917920
UniProt:
A0A6I9QZZ1
LinkDB
All DBs
Position
3:1485401..1508231
Genome browser
AA seq
982 aa
AA seq
DB search
MSSDIRKWFMKQHDKGNGTASKPAAKPASAASEKPPSPVLDELVQGAQENSGRRKTSKYF
ATTTATESGSKQTTKDGKVTQKSPAKRKAQKIREDFQDDVKPVPAKKFHKDEDDDFVPSN
DKKKAAEVKPSKKLKSGSGGGVSKNSVDKDDDDYDEDELDDKYVETPIKAGGRGRGGRGA
GAAAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSLEREEA
EDLIKHHGGRVTGSVSKRTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAK
AHVQEEQKKKVEKSPIKSTPLKVEAKVDRVGSGGRKDAAKIVKSGTSPGKPKIQSTDRSS
LTWTEKYRPKVPNDIIGNQSLVKQLHDWLIHWNEQFLHTDQKGKGKKQADSGSKKAVLLS
GSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELISNEALS
CGKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVN
YCLLLNFRKPTKQQMAKRLKQIADAEGLQVNEIALEELADRVNGDMRMAINQLQYMSLSQ
SVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIIQE
NYINYRPSSIGKDDNGVKRMNLLARAAESIGDGDIVNVQIRRYRQWQLSQAGSFASCIIP
AALMHGHRETLEPGERNYNRFGGWLGKNSTTGKNLRLLEDVHIHILASQEANMNRETLRV
DYFTLLLKQLTDPLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVELSKFRGHPNPMEGIQ
PAVKAALTKAYKQGSSSRVVRAADLITLPGVKKAPKKRIAAMLEPVEGGLAEENGDAVAE
GEEEDSSDSEDTDDVGSNTNGEAKPQLDLLGNKPKGVQVELDLKSNGKSKSGAKKKTPAS
KSQGSESAGKGPRGSGGGKRKR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggatataaggaaatggtttatgaagcaacatgacaaggggaatgggactgct
tccaagcctgctgcaaagcctgcgtcggctgcttctgagaagccgccttcacctgtttta
gacgaattggtgcaaggagctcaagagaattcaggtagaagaaaaacaagcaaatacttt
gcaactaccactgcaacagaatcaggctctaaacaaacaacaaaagatggaaaggtgact
caaaaatcacctgcaaagaggaaggcccaaaaaattagggaggattttcaagatgatgtt
aaaccagtgcctgcaaagaagtttcacaaggatgaagatgatgactttgtgccatccaat
gacaagaaaaaggcggccgaggtcaaaccctccaagaaattgaaaagtggatcaggtgga
ggagtttcaaagaattctgttgataaggatgatgatgattatgatgaagatgagcttgat
gataaatatgttgagactcccattaaagctggtgggagaggcaggggtggaagaggagca
ggagcagctgcaggaggaagaggcagaggtggtgggagaggtgggttcatgaattttggt
gagaggaaggatccaccacacaaaggagagaaggaagttccagaaggtgctcctgaatgt
ttagctggtctgacttttgttataagtgggacacttgacagtttggaaagggaagaagca
gaagatctaattaagcaccatggtggtcgggtcactggatctgtcagcaaaagaacaagt
ttccttctagctgatgaagacattggtggaaggaaatcttcaaaagccaaagagttgggt
atcccctttcttactgaggatggattgtttgacatgatccgaaaatccaagcctgcaaaa
gcacacgtgcaggaagaacaaaagaagaaggttgagaaatcaccaataaagagcactcca
cttaaagttgaagcaaaagtagatcgagttggttctggaggaagaaaagatgctgcaaaa
attgttaagtcaggcacctctcctggcaagccaaaaatccaatccactgaccgcagttca
ttgacatggaccgagaaataccgacctaaagttccaaatgacatcattggcaaccagtca
cttgttaagcaacttcatgattggttaatccactggaatgaacaatttctgcatactgac
caaaaggggaaggggaaaaagcaggctgatagtggatccaaaaaagctgtactcttaagt
ggatctcctgggattgggaaaagcacttcagcgaagttagttagtcagatgcttggattt
caggctattgaggttaatgcaagtgataatcgtggcaaggcagataccaaaattgttaaa
ggagtcggtggaaatacatcaaattctatcaaagaacttatcagcaatgaagccctaagt
tgtggcaagaactggtcaaagcatccaaaatctgtactaatcatggatgaggttgatggt
atgtctgctggagatagaggtggtgttgctgatcttattgctagtataaaaatatctaaa
atccctatcatttgcatctgcaatgaccgctacagtcagaaacttaagagtcttgtcaac
tactgcctgctgcttaacttcaggaagcctactaaacagcagatggcaaagaggttgaag
cagattgcagatgctgaaggtcttcaagttaatgagattgcacttgaagaacttgcagac
agagtgaatggagatatgcggatggcaataaatcagttgcagtacatgagcctctcgcaa
tcagtaatcaattatgatgatatcagacagcgccttcttagtagttcaaaagatgaagat
atttcaccttttacagccgttgacaagttatttggtttcaatggtggaaaattgcgtatg
gatgagaggattgacttgagcatgagtgaccctgacctggtccctcttattattcaggaa
aattatatcaactatcgaccgtcttctattggaaaggatgacaatggagtcaaaagaatg
aacttgcttgcccgggctgctgagtctattggggatggtgacatagtcaatgtccaaatt
agaagatatcgtcaatggcagctatcccaagctggatcatttgcctcttgcataattccg
gctgctttgatgcatggtcacagggagacccttgaaccgggagagcgaaactataacaga
tttggtggatggttgggaaagaactcaacaacgggaaagaacttgaggcttttggaggat
gtccatattcatattcttgcctcccaggaagctaatatgaacagggagactttgcgggtg
gattactttactcttctgctgaaacagctgacagatcctctgcgagtgatgcccaaggag
gaagctgttcagaaggttgtggagttaatggacacttattccctaagtcaagaggatttt
gataccattgtggagctgtccaaattccggggccaccctaatccaatggaaggaattcaa
ccagcagttaaagccgcattaaccaaggcatataagcaggggagcagctctcgtgtggtg
cgagcagcagacttgatcactcttccaggcgtgaagaaggctccaaaaaaacgaatagca
gcaatgctggagccagtggagggtggtttagctgaagaaaatggagatgctgtggcagaa
ggtgaagaagaggattcttctgattcagaagatactgatgatgttggatccaacactaat
ggtgaggccaagccacagctggatctccttggcaataaacctaaaggagttcaagtggag
cttgatttgaaaagtaatgggaaatcaaaatcaggtgccaagaagaagacccctgcaagc
aaatctcagggatccgagtctgcggggaaggggccccgaggttcagggggtggaaagagg
aagagataa
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