Elaeis guineensis (African oil palm): 105042474
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Entry
105042474 CDS
T03921
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105042474
03015 mRNA surveillance pathway
105042474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105042474
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105042474
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105042474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105042474
NCBI-ProteinID:
XP_010918007
UniProt:
A0A6I9QZM1
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Position
3:complement(3686901..3698198)
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AA seq
495 aa
AA seq
DB search
MAENATTIPAAETALPVVEKKVEEKRSWADEEPEEEATAPPPPPSSSNSSGAEAETAELK
KIEKLSISGGLEDPNESDIKVTTGETVYESAVKFEDLPLSRELLKGLKLEMNFSRPSKIQ
AVTLPMILTPPFKDLVAQAHNGSGKTTCFVLGMLSRVDPSKKIPQAICICPTRELAIQNQ
NVLLKMGKYTGITSMCAIPSDSSNYIPISRRPPVTDQVVIGTPGTIKKWISAKKLATRDM
KILVFDEADHMLAEDGFKDDSERIMKDIRRSSGDCQVLLFSATFNETVKAFVSRVVKDAN
QIFVKKEELTLAKVKQYKVQCPDEQAKMEVIRDKIFEFGQKVGQTVIFVRTRNSATMLHT
SLLKEGYECTSIQGALKQEDRDKIIQEFKVGLTRVLITTDLLARGFDQEQVNLVINFDLP
VKYDTWEPDCEVYLHRIGRAGRFGRKGAVFNLLCTDRDRLLLEKIERHFNHYIPEVPNWR
SEEDFESALKDAGLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacgccacgaccatcccggctgcggagacggcgttgccggtggtggagaaa
aaggtggaggaaaagagatcctgggccgacgaagagcccgaggaggaggcgaccgctccc
cctccgccgcccagcagcagcaacagcagcggagcggaggctgagacggctgagctcaag
aagatcgagaagctcagcatttcggggggactcgaggatccgaatgaatcagatataaag
gtgacgacgggggagacagtttatgaatcggctgttaaatttgaggacctacccctgtca
cgggagcttctcaagggtttgaaactcgagatgaattttagcaggcccagcaagattcag
gcagtaaccctgccgatgatcctaacgccccccttcaaagatctggtggctcaagcacac
aatggctctggaaagactacgtgttttgtgcttggcatgctcagtagagtcgatccgagt
aaaaagataccacaagcaatctgcatatgccctaccagagagctagcaatccagaatcag
aatgttcttttgaagatgggaaagtatactggcataacttcaatgtgtgctataccatca
gattcgtcgaattatatcccgatctcaagacgtccaccggtaactgatcaggtagtgatc
ggcactcctggtacaattaaaaagtggatctcagcaaagaagttggccacacgggatatg
aagatccttgtttttgatgaggctgaccacatgctagctgaggatggctttaaagatgat
tctgagagaatcatgaaggacatccgaagaagcagtggcgactgccaggttctactcttt
tctgctacctttaatgaaactgtcaaggcatttgtatcaagagttgttaaggatgcaaat
cagatctttgtgaagaaagaagagctcacattggcaaaagtgaagcaatacaaggttcaa
tgtcccgatgaacaagcaaaaatggaagtgataagggataaaatttttgaatttggacaa
aaggtggggcagactgttatatttgtccggacgaggaatagtgccaccatgttacataca
tcattacttaaggaaggttatgagtgcacatcaattcaaggtgcactcaagcaggaagat
agggacaaaattatacaggaatttaaagttggactaacccgtgtccttataactaccgac
cttcttgctcgaggttttgatcaagaacaggttaatctggttatcaactttgatcttcct
gtaaaatatgatacatgggaacctgattgtgaagtttacctgcataggattggtagagct
ggacgttttgggcgcaagggtgctgtattcaacttgttatgtacggacagggatagatta
ctgttggagaaaattgagcgtcacttcaaccactacattcctgaggttcctaactggagg
agtgaagaggacttcgagtctgcacttaaggatgcaggtttgctatga
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