KEGG   Elaeis guineensis (African oil palm): 105042570
Entry
105042570         CDS       T03921                                 
Name
(RefSeq) uncharacterized protein
  KO
K11804  DDB1- and CUL4-associated factor 8
Organism
egu  Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:egu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egu04121]
    105042570
Ubiquitin system [BR:egu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105042570
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 105042570
NCBI-ProteinID: XP_010918155
UniProt: A0A6I9QZZ0
LinkDB
Position
4:135421232..135442658
AA seq 495 aa
MRRACKRSRGFGRRIVELCNREVGDVSPRSFAHRIAASEDLVLRLGIHKKLEKHRGCVNT
VSFNADGDILVSGSDDRMVILWNWDAGLVKLCFHSGHSNNVFQAKFMPYMEDRIIVTCAA
DGEVRHAEIREGGKVLTSLLAQHEGRAHKLAIEPGSPYIFYTCGEDGLVQHFDLRTKSAT
KLFTCKSFPDRLEYQETVQLNAIAIDQRNPNFFAIAGTDEYARVYDIRKYKWDGSTDCDY
PTNCFCPPHLIGDGHVGITGLAFSDQSELLTSYSNELIYLFTKDQGLGPNPVHKSPKPAA
KDIETGDGSKSFSSSSPADANLPEPQVYKGHHNRETVKGVSFFGPNCEYVTSGSDCGRIF
IWRKRDGELLRAMEGDKYVVNCIEPHPYGTVIASSGIENDVKIWTPNALEPAPPVNMDEL
KRHKRRSRFYRFSFPEDMIAQVLAMQRRRSNSGHRGEDWPGNADLVDLIMQLTDGNSSSD
ENGDSSGNPGDCIVN
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgagaagggcttgcaagagaagccggggcttcggccgcaggatcgtcgagctctgcaac
cgggaggtgggcgacgtctccccgagatccttcgcccatcgcatcgcggcttccgaggac
cttgttctgcgcttgggaatccataaaaaactggagaagcatcgaggctgtgtgaatact
gttagcttcaatgcagatggcgatattcttgtgtctggttctgatgacagaatggtaatt
ttgtggaattgggatgctggtcttgttaaattgtgcttccactcaggtcattcaaacaat
gtttttcaagcaaaattcatgccatacatggaggatcggatcattgttacctgtgctgca
gatggggaggtgagacatgctgagatacgtgaaggtggaaaggtgttgacttcattgcta
gcccaacatgaaggacgggctcataagttagccattgagcctggaagcccttacatattt
tatacctgtggtgaagatggcctagttcaacattttgatttgagaacaaaatctgctaca
aagctatttacatgcaaatcttttcctgatagattggagtatcaggaaaccgttcagcta
aatgctattgcaatagatcaaaggaaccccaatttttttgcaattgcaggaactgatgaa
tatgctcgagtttatgacatccgcaagtacaaatgggatggatcaactgattgtgattat
ccaaccaactgtttctgcccaccacatcttattggtgatggacatgttggaataacaggt
ttggcattctcagaccagagtgagctgctgacctcatacagtaatgagctgatttatctt
ttcactaaagatcaaggtttgggacccaacccagtccataaatccccaaaacctgcagcc
aaggacattgagactggagatgggtccaaatcattttcatcatcatcccctgctgatgca
aatctgcctgaacctcaagtatacaagggacaccataaccgtgagactgtgaagggtgtg
agcttttttggtcccaactgtgagtatgtcactagtgggtcagactgtggccgaatcttc
atttggaggaagagagatggggaattgttgcgtgccatggaaggagacaagtatgtggta
aattgtattgaacctcatccatatggcaccgtgattgcaagtagcggcattgagaatgat
gttaagatttggactcccaatgccctggaaccagccccaccagtaaatatggatgagtta
aagcggcataagagaagaagcagattttaccgattctcattcccggaagacatgatagcg
caggtgttggcaatgcagcggcgacgttccaactcggggcaccgtggtgaagactggcca
ggtaatgctgacctggtggatcttataatgcagttgacagatggaaatagttcttctgat
gagaatggagattcgtctgggaatccaggggattgtatagtcaactga

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