Elaeis guineensis (African oil palm): 105042571
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Entry
105042571 CDS
T03921
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105042571
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egu01009
]
105042571
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105042571
Protein phosphatases and associated proteins [BR:
egu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105042571
Spliceosome [BR:
egu03041
]
Common components
Common spliceosomal components
SR proteins
105042571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_5
Motif
Other DBs
NCBI-GeneID:
105042571
NCBI-ProteinID:
XP_010918156
UniProt:
A0A6I9QZV5
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All DBs
Position
4:6637056..6644372
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AA seq
246 aa
AA seq
DB search
MADSPRMRYSQSPSPDRRHSGSRSRGRSRSRSRTPIPRSRSRSGSRGRDDSLNPGNTLYV
TGLSSRVTERDLEYHFSKEGKVKGCFLVVEPRTRVSRGFAFVTMDTVEDADRCVKYLNQS
VLEGRYITVEKSRRKRPRTPTPGNYLGVKSTRDTRDRYDRDRYRGGYGRDDYGGGYHRSP
RRSPYRGGRGYSPRRSPYGGRSRRERSRSIPYSPYISPDRGYGRRANVYARNTSLVWDNP
DVRMLG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctccgcgcatgaggtattcacagtccccttctcctgataggaggcactct
ggatcaagatctaggggtcggtctcggtctaggtctcgaacacccattcccagatcacga
tcgcgctctggaagccgtggcagggatgattcactaaatcctggaaatactctatatgta
acgggcctgtctagtagagtcacagaaagagaccttgagtatcacttctccaaggagggc
aaggttaagggatgctttctcgttgttgaaccacgaactcgtgtctctcgtggttttgca
tttgtgaccatggatacagttgaggacgctgaccgctgtgtcaagtatctcaatcagtca
gttttggagggccgatacataactgtggagaagtcgagaagaaaaaggccacggacgcct
acacctggaaactaccttggagtgaaaagcacccgagatacccgagatcgttatgaccgt
gacaggtaccgtggaggatatggtcgtgatgactatggtggtgggtaccatagatcacca
agacgctcaccatatcgaggtggtcgaggttactcccctcgtcggtcaccttatggtggt
agatcaagaagggagcggtcaagatctattccttattctccatatataagtccagataga
ggctatggtcgtcgtgcaaatgtttatgccaggaacactagtttggtatgggacaatcct
gatgttagaatgctgggttag
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