Elaeis guineensis (African oil palm): 105042781
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Entry
105042781 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin homolog
KO
K10867
nibrin
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105042781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egu03032
]
105042781
03400 DNA repair and recombination proteins [BR:
egu03400
]
105042781
DNA replication proteins [BR:
egu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
105042781
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
105042781
BRCA1-C complex
105042781
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
105042781
NCBI-ProteinID:
XP_029119735
UniProt:
A0A8N4F3C1
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Position
4:complement(59649847..59686096)
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AA seq
584 aa
AA seq
DB search
MVWGLIPVDSPRGAQKYYIFSRGTYKVGRKDCDIIVQTDTSVSRVHAEIVVDKMTSYDAS
HIGSGTFPSYARIIDRSRYGTSVNKELGADGVXLRKDLEAKLKDGDLVTFGTGNATFRFC
FVPLVIFLHCSKPIQANHSLEASISSIGAHISCTWSNECTHVLVDESSPVTLELIEAILS
KKPIVLSDWCKVLAEQKICIEIPSWTSSPEWLLVRYSSYIPSLTIDGMLVRVVEPKSREK
CLADYTFVLGSSHKYKFGDKFRSLLEVAGAKSFHVDEFCSNSQTSADGENNQVILVIPGE
PTNEFDHFRELSSLSRVTEVRLVAAILSGHLESSIIEPPAFIISSSHSTDETMVADSDVE
IDTATSDRAAAIANLPDALRCEHDEIVKESENREDVRNFEDTPKNVNYSLYEHEEKNPTV
SEDGEETRDRDDRNNCTKYSVLSPDKSNISGPKFENVGVMKRVDKSEEAVADRHENSDII
YSQDLIVKNIGTLIPVRSTTKKVVNFKCFRKRNTMSGNSFRNLIPFSKDPYLESGCGSNE
SSEYMREEKKRKQMEAIAEDLFNNEKARKRATACTSLQALLSRR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggattgattcccgtcgattcccctcgaggtgcacagaaatactacatcttc
tccagaggaacatacaaagttggtcgaaaagattgtgatattattgtccaaacagacacg
tcagtatcccgagttcatgcagagattgttgttgataaaatgacttcttatgatgcttct
catattgggtctggtacttttccctcctatgcccggatcattgatcgctcaagatatggt
acatctgttaataaagaacttggggctgacggagttngtttgcgtaaagatctggaggca
aaacttaaggatggggatttggtaacatttggaactggcaatgcaactttcaggttttgt
tttgtgccccttgtaatctttcttcattgctcaaagcccatccaagcaaatcattcactt
gaagccagcatttcatctattggggcacacatttcttgtacttggagcaatgagtgcacg
catgttcttgttgatgaatcttctccagtaacactcgagcttattgaagcgattctttct
aagaaaccgattgtccttagtgattggtgtaaggtccttgctgagcaaaaaatttgcata
gaaattccttcttggacttcttcaccagaatggcttctggttcgttattccagctacatt
ccgagtttgactatagatgggatgttggtaagggttgtagagcccaagtctcgtgagaaa
tgtctagcagactatacctttgttctgggatcatcacataagtataaatttggtgataag
ttccgatcactacttgaagtggctggagcaaaatctttccatgttgatgaattttgttca
aatagccagacttcagcagatggagaaaacaaccaagtaattctggtaattcctggagaa
ccaactaatgaatttgatcacttccgtgagctgtcttccttgtccagagttactgaagtg
agattggttgctgccattttatctggacacttggaatcatccatcattgaaccccctgct
tttatcatttcatcttcacattccactgatgagactatggtagcggattctgatgttgaa
attgatactgccacatctgatcgtgctgctgccatcgccaatcttcctgatgccctcaga
tgtgaacatgatgaaattgtaaaagaatctgaaaacagagaagatgtgagaaattttgag
gacaccccaaaaaatgtaaattattccctctatgaacatgaagagaaaaatccaacagta
tctgaagatggagaagaaaccagagatcgagatgacagaaataactgtactaaatattca
gtcttatctccagacaagtccaatatttcaggcccaaagtttgagaatgttggtgttatg
aaaagggtggacaaaagtgaggaagctgttgctgacagacatgaaaattcagacatcata
tacagtcaagatttgatcgtaaagaatattggcactctgattcctgttagatctaccaca
aagaaggttgtcaacttcaaatgctttagaaagagaaatacaatgtctggcaatagcttc
agaaatctcattcctttttcaaaagatccatatcttgaatctggttgtgggagcaatgaa
tcatctgagtacatgagggaagagaagaagcgtaagcaaatggaagctatcgccgaggac
ttgttcaacaatgagaaggcgaggaaacgtgccactgcttgtacttctcttcaagccctt
ctttcacgtcgctga
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