Elaeis guineensis (African oil palm): 105042805
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Entry
105042805 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105042805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105042805
Spliceosome [BR:
egu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105042805
Complex C
U5 SnRNP specific factors
105042805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
HAT_PRP39_N
Suf
TPR_19
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
CFAP70_TPR_C
TPR_16
TPR_CcmH_CycH
TPR_2
TPR_8
TPR_15
TPR_1
ubiquitin
Y4kD_C
PMC2NT
FANCG_N
Motif
Other DBs
NCBI-GeneID:
105042805
NCBI-ProteinID:
XP_010918430
UniProt:
A0A9B2EGB4
LinkDB
All DBs
Position
4:52122444..52128248
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AA seq
1036 aa
AA seq
DB search
MVFVRTLDCKTLALDLNINSTSLHALKLAVEAGSGIPVHLQRLFLSSRRLIAAAVGGGDD
SSTTLADLAVCPDSTLTLHIPLLGGTQTTPAGPARPARYDFLNSKPPPNYVAGLGRGATG
FTTRSDIGPARAAPDLPDRSATTIGGAAAPGIGRGRGKGPGGEEEEEEEEADDKGYDENQ
KFDEFEGNDVGLFASAEYDEDDKEADAVWESIDKRMDSRRKDRREARLKQEIEKYRASNP
KITEQFADLKRKLADLTPDQWESIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEQEHV
TALDPKSRAVGGTETPWSQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLT
DLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIQKG
CEECPKNEDVWLEACRLASPDEAKAVIAKGVKAIPNSVKLWLQAAKLEQNDVNRSRVLRK
GLEYIPDSVRLWKAVVELANEEDARVLLHRAVECCPLHVEMWLALARLETYEQAKKVLNK
AREKLSKEPAIWITAAKLEEANGNIASVGKVIERGIRSLQREGVEIDREAWMKEAEAAER
AGSIATCQAIIHHTIGVGVEEEDRKRTWVADAEECKKRGXIETARAIYAHALTVFLTKKS
IWLKAAQLEKSHGTRESLDALLRRAVTYRPQAEVLWLMGAKEKWLXGDVPAARAILQEAY
AAIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNMAEER
RLLGEGLKLFPSFFKLWLMLGQMEERLGQGEQAKEAYENGLKHCPNCIPLWLSLANLEER
MNGLSKARAVLTMARKKNPQSPELWLAAIRAESRHGNKKEADTLMAKALQECPTSGILWA
ASIEMVPRPQRKSKSADALKRCDHDPHVIAAVAKLFWYDRKVDKARNWFNRAVTLAPDIG
DFWALYYKFELQHGTEEQQKDVLKRCISAEPKHGERWQAISKAVENSHLPIEALLKKAVV
ALGKEEISTTTDGIKS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggtctttgtacgaaccctagactgcaaaaccctagccctcgacctaaacattaattcc
acctccctccatgccctcaagctcgccgtcgaggccggatccggcatccccgtccatctc
cagcgtctctttctctcttcccggcgcctcatcgccgccgccgtcggcggcggtgacgac
tcctccaccaccctcgccgaccttgccgtctgtccagactctaccctgaccctccacatc
cccctcctcggcggcacccagaccaccccggccggcccggcaaggcctgcccgctacgac
ttcctcaactccaagccacctccgaactacgtcgccgggcttggccgtggcgccaccgga
ttcaccacccggtccgatatcggtccggcccgcgccgccccggacctccccgaccgctcc
gccaccaccatcggcggtgccgccgcccccggcatcggccgcggccgaggcaagggacct
ggtggcgaggaggaggaggaggaggaggaggccgacgacaagggatacgatgagaaccag
aagtttgatgagttcgaggggaacgatgttgggctctttgcttccgccgagtatgatgag
gacgacaaggaggcggatgctgtgtgggaaagcatcgataagaggatggattcgagaagg
aaggatcggagggaggcgaggctgaagcaggagatcgagaagtaccgtgcttcaaaccct
aagatcacggagcagtttgccgacctcaagaggaagctagctgatctgaccccagaccag
tgggaaagcatccctgagattggggattactcgctcaggaacaagaagaagcggttcgag
agcttcgtgccggtgccggacaccctcctggagaaggcaaggcaggagcaggagcacgtc
actgccttggaccccaagagccgagcagttggggggacggagactccgtggtcacagact
ccggtgactgatctcacagccgttggagaaggaaggggcacagtgctttctttgaagctg
gatcgcttgtctgactctgtttcaggacttactgtcgtcgatccaaagggttacctgact
gatctcaagagtatgaagatcacgagtgatgctgagatttctgatatcaagaaggcgaga
ctgttgcttaagtcggtgacccagacaaaccccaagcacccgccgggatggattgcagct
gccaggctggaggaggttgcggggaagatccaggcagcaaggcagttgattcagaagggg
tgtgaagaatgccccaagaacgaggatgtctggttggaagcttgtaggttggcaagcccg
gatgaagcgaaggcagtgattgcaaaaggtgtgaaggctattccgaactcagtgaagcta
tggttgcaggctgcgaaattggagcagaatgatgtgaaccgcagcagagtgttgaggaaa
gggttggagtacatccctgattctgtgaggttgtggaaggctgttgtggagttggcaaac
gaggaggatgcaagagttttgctccatagggctgtggagtgctgtccgcttcatgttgag
atgtggcttgcactcgcaaggctggaaacctatgagcaggcgaagaaggtgctcaacaag
gcaagggagaagctttcgaaggagcctgcaatttggatcactgctgcaaagcttgaggaa
gctaatggtaatattgcatcagttgggaaggtaatcgagagaggtataaggtctttgcag
agagaaggtgtggagattgacagagaagcttggatgaaggaagcagaagctgctgaacga
gctgggtccattgcaacttgtcaggctatcattcatcatacaattggcgttggggtggag
gaagaagataggaagaggacatgggttgcggatgctgaggagtgcaagaagcgtggtntc
attgagacagctcgggccatctatgcacatgcacttacagtgttcctaaccaagaagagt
atttggcttaaggcagcccagcttgagaagagccatgggactagggaatctctcgatgcc
ctcctaaggagggcagtcacttataggccacaggctgaggtactatggctgatgggtgcg
aaagagaagtggctgngcggggatgttcctgcagctcgagcaattcttcaggaagcatat
gctgcaattcccaattcggaggagatttggcttgctgcattcaagcttgagtttgagaac
catgagccagagagagcaagaatgcttctagctaaagcccgagagagaggaggaactgag
agggtgtggatgaagtctgctattgtcgagagggaattagggaacatggcagaggaaagg
aggctgctgggggaaggattgaagttattcccttcatttttcaagttgtggctaatgctt
ggtcagatggaggaacgacttggtcaaggagaacaggcaaaggaagcttatgaaaatggc
ctgaaacactgccccaattgcatccctctttggctctcgcttgctaacctagaggaaagg
atgaatggtctgagcaaagctcgtgctgttcttactatggctagaaagaagaatcctcag
agcccagaactttggcttgcagctatccgtgctgaatccagacatgggaacaagaaggaa
gcagataccttgatggcaaaagcattgcaggaatgtccaacaagtggaatcttgtgggct
gcttccattgagatggttccacggcctcaacgcaaatcaaaaagtgctgatgctcttaaa
cggtgtgatcatgatccacatgttattgcagctgtggccaaactcttttggtatgatagg
aaggtggacaaggcaaggaactggttcaacagggcagttactcttgctcctgacattgga
gacttctgggccttgtactacaaatttgaacttcaacatggtactgaggaacagcaaaag
gatgtcctgaaaagatgcatttctgcggagccaaagcatggtgagagatggcaggcaatc
tccaaggctgtggagaattcccacctgccaattgaagcccttcttaagaaagcagtggtt
gctctgggtaaagaagagatctctaccaccactgatggcatcaagtcctaa
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