Elaeis guineensis (African oil palm): 105042810
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Entry
105042810 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egu01009
]
105042810
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105042810
Enzymes [BR:
egu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105042810
Protein phosphatases and associated proteins [BR:
egu01009
]
HAD phosphatases
Fcp/Scp phosphatases
105042810
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105042810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
105042810
NCBI-ProteinID:
XP_010918441
UniProt:
A0A6I9R0I3
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Position
4:52498381..52517724
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AA seq
950 aa
AA seq
DB search
MFKSAVYHGNSLIGEVEISPQNSNPGAWLREIRISHFSPPSERCPPLAVLHTIASASVSF
KMESKSPPSDESQLCSLHAACLRDQKTAVIPLGEEELHLVAMKPRKNLMHYACFWGFNVA
SGLYNSCLGMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKISSETDPQRVTGMLA
EVKRYQDDKSILKQYAENDQVVENGNVFKVQSEVVPPLSDNHQLITRPIIRLQEKNIILT
RVNPSIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMAEKDYALEMWRLLDPDSSL
INAMQLLDRIVCVKSGSRKSLLNVFQDGICHPKMALVIDDRLKVWDDKDQPRVHVVPAFA
PYYAPQAEANGNVPVLCVARNVACNVRGGFFKDFDEGLLPRISDIFYEDEMKDFPSAPDV
GNYLISEDDNATSNGSKDLLCSEGMTDAEVERRLKEANGNVQAIYPMVNXFDPSSMSSIQ
HVMASSSGVPSLAATQVMMPLPNNQCPQPIALGRPLGQPGLPEPSLQGSPAREEGEVPES
ELDPDTRRRLLILQHGQDIRDPTPQFPVRPPLHVAVSPVQSRGSWFPLEEEMNPRQLSRA
PKEFSLEPETVCFDKKRPNHQSYYRTGENSISSDRVLNENRRLAMQLRHGDDRLRPNHAA
ANCDSFSGEEMPIGRISSSHRDIQFESGQVTVQYAGTPAGVLQDIATKCGAKVEFRTALC
DTTELQFSVEVWFVGEKIGEGIGKTRKEAQQQAAEFSLRTLANKYLSNATSDTLRGDMLK
PSNAKENGFISDPNSFGYPAYVRDDLLGVASTSEESRFLDLRLEGSKKSTASVAALKELC
TIEGFNLIFQPQPSASTDSVGKGEVYAQVEVAGQILGKGVGTTWEEAKLQAAEEALGTLK
SMLGQFTQKRSGSPRSVSAAPNKRLKPDFSRMLQRIPSSGRYSKNETPVP
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatcggctgtttatcatgggaattccctaattggggaggtggaaatctccccc
cagaactcgaatcctggcgcctggctcagggagatccggatctcccacttctccccgcct
agcgagcggtgcccaccgctcgccgtgctccacactattgcctcggccagcgtcagcttc
aaaatggaatcaaagtcgccaccgtccgatgagtcacagctatgttccttgcatgctgca
tgcctcagagatcaaaagactgcagttattccattgggagaggaagaattgcacttggtg
gccatgaagcctaggaaaaacctcatgcactatgcatgtttttggggttttaatgttgca
tcaggactgtataactcttgccttggcatgttgaacctaaggtgcctagggattgtgttt
gatcttgatgaaaccctcatagttgctaataccatgcgctcattcgaggacaggattgat
gctcttcaacggaaaattagtagtgagacagatccacaacgagtaacaggtatgttggct
gaggtcaagcgctatcaagatgacaaatctatcttgaagcagtatgcagaaaatgaccaa
gtcgttgaaaatgggaatgtctttaaagttcaatctgaggttgtaccgcctttatctgat
aatcatcaattgataacccgtccaattatacggttacaagagaagaatatcattcttaca
cgtgttaatccatcgatacgggatactagtgtccttgtacggttaagacctgcatgggag
gaactaagaagctacttaactgctcgaggccgcaagcgttttgaggtctatgtttgtaca
atggctgaaaaagattatgctttggaaatgtggaggcttcttgaccctgattcaagcttg
atcaacgctatgcaacttcttgaccggatagtgtgtgtgaaatcaggctcaagaaagtca
ctccttaatgtctttcaagatggaatttgccatccaaagatggcactagttattgatgat
cgtctgaaagtttgggatgataaagatcaacctcgagttcatgttgtccctgcatttgct
ccatattatgctcctcaggcagaggcaaatggcaatgtcccagttttatgtgttgcaaga
aatgttgcatgcaatgttaggggtggttttttcaaagactttgatgaaggcctactgcca
cgaattagtgacattttctatgaagatgaaatgaaagatttcccatctgctccagatgtg
ggcaattatttaatttcagaggatgataatgctacttcaaatggaagtaaagacctgctt
tgttctgagggcatgacagatgctgaggttgaaaggagattgaaggaggcaaatggcaat
gtccaagctatctatcccatggtcaatnactttgatccgagctccatgtcttctatacaa
catgttatggcttcttcatccggtgtaccttcgctggcagccactcaagtgatgatgcct
ttgcctaacaaccagtgtccacagcccattgcattaggcaggccattaggtcaacctggg
cttccagaacctagtttgcaaggttctcctgctagggaagagggtgaggttcccgagtca
gaattagatccggacacaaggagaaggcttcttatattgcaacatggtcaagacatacga
gatcctactcctcaatttcctgtgagaccccctctccatgtcgcagtttctccagtgcaa
tcacggggaagttggtttccattggaggaagagatgaatccaagacaattgagcagggca
cctaaagaattttctttagaacctgagactgtatgttttgataaaaaacgacctaaccat
caatcttactatcgcactggggagaattctatttcctctgatagagttcttaatgaaaat
cggagattggctatgcagttacgtcatggagatgatcggttgagaccaaaccatgcagca
gcaaactgtgattccttctcaggtgaggagatgccaatcggtcgaatttcttctagccac
agggacatccaatttgaatctggccaggtcactgtacaatatgcgggaactcctgctggg
gtcctacaggatattgcaacaaagtgtggagcaaaggtggaatttcgaacagctttatgt
gacactacggaattgcagttttctgtggaggtttggtttgttggagaaaaaataggggaa
ggaattggtaaaacgaggaaggaagcccagcagcaagctgctgaattctcccttcgaact
ttggctaataaatatttgtcgaatgctacatctgatactctgcgtggagatatgctaaag
ccctctaatgctaaagaaaatggttttataagtgatccaaactcttttggatatccagca
tatgtcagggatgatcttttgggagtagcaagcacttcagaagagtcccgttttttggac
ctgagactagagggttcaaaaaaatcaacagcttctgttgctgctctcaaagaactatgt
accattgagggatttaacctaatttttcaacctcagccctcagcttcaactgattcagtc
ggtaaaggggaagtgtatgcacaggttgaagtagctgggcagatattaggaaaaggagtt
ggaacaacctgggaagaagctaagctgcaggcagctgaagaggcccttggaactttgaag
tctatgcttggtcaatttactcagaaacgctcaggatctccaagatcagtgtcagcagct
ccaaacaagcgtttgaagccagatttttcacggatgttgcagagaatcccatcatctggt
agatattctaagaatgaaactcctgtgccttga
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