Elaeis guineensis (African oil palm): 105042819
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Entry
105042819 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105042819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105042819
Enzymes [BR:
egu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105042819
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105042819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
105042819
NCBI-ProteinID:
XP_073112657
LinkDB
All DBs
Position
4:53144708..53218889
Genome browser
AA seq
1175 aa
AA seq
DB search
MASKATKQDYEALRELFRPHIDSFXYFLDEGLEKALLSIRPVEISDPSVGGKLRIYFENP
QVFHPLREGRITKSKGGITEALYPEQCRQAGTTYKGEFKVTICLQYNDQQPVQIPMNFGH
LPIMLRSKLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRS
SFRSRGVGYSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGIVLKAL
IDTSDREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGE
YFRPAMDGFENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTVAPDNP
DALQNQEILLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIVHQVVKFLNRN
AASLGRSIESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFTKMR
ITSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIRMSILT
VLVGVGMTPLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSLSGIPD
DLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIELIGPFEQAFMEIRCA
DGGHGGRRQSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQAL
QFRADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSS
VDRGLCRGHIYQTESIDLTKNHDREDQVLEIFARSSDKTMKSSIDTDGLPYIGQVIHPNE
PLYSSYNTLTSVTKPTLLKGSEPVIVDYVSVDGATSKNYMQKVNIRTRRTRYPIIGDKFS
SRHGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGK
FVDATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIF
IGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYL
LHDRLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKSYTCHACKTSK
GMETVAMPYVFKYLAAELAAMNIKMELRLSNRAGC
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaggctacgaagcaggactacgaggccctccgcgagctcttccgcccgcac
atcgactccttcnaatatttcctcgacgagggccttgagaaggcactcctctccatccgt
cccgtcgagatctccgacccctccgtcggcggcaagcttagaatatattttgaaaatccc
caagttttccatccattgagggaaggccgtataacgaagtccaaaggcggtataacggag
gccctgtatccagagcagtgcaggcaagcggggacgacgtataaaggagaattcaaggtg
acaatttgtcttcagtacaacgatcaacagcccgtgcaaatacctatgaactttgggcat
ctgcccataatgttgaggtcaaaactctgccacttaaaagatgctgaccctcagaagcta
attttccataaggaggaggcaactgaaatgggtggttacttcatttgtaatgggttggag
cgacttggccgacttttaattgtgccgaaacgtaactatccaatgggcatgattcgttca
tcatttcgttctcgtggtgtcggatatagtgataaagcagtggtcatgagatgtgttcga
gaagaccaatcttctgtgacagttaagttgtattaccttcaaaatggaagtgcaagactt
ggattctggatacgaggaagggagttcttacttcccattgggattgttttgaaggctctt
attgacaccagtgaccgtgaaatctttgtgagcttgacatgctgttataatgatagatac
caaaagcagaggggtgcagttggcagtcaaatcattggtgaaagggctcaaataattctt
gaagaagtcagggatttgtctctcttgacaagctctcagtgcttaaagcatattggagag
tatttccgacctgccatggatggatttgaaaatgagagtcatacaactgttgcagaagct
gttcttagagactatgtttttgtgcatctcactaccaaccatgacaagttcaatttactg
atttttatgctgcagaaactttacgcacttgttgatcaaactgttgcaccagataaccct
gatgcattacaaaatcaggagattctactgcctggacacttgattaccatttatgttaag
gagaagttccaagattggttaaacaagtcaagacgtcagcttcttgatgagcttggaaag
aatgagaaaaagctggacttcagtattgtacaccaggtagtaaaattcttgaatcgaaat
gctgctagtttaggaaggtccattgaaagtatgataaaagttggaagattggctacgtca
tcaggtcttgatttgcctcagagagaagggatgactattcaggctgagaggcttaacttt
taccgcttcctctcacattttcgttccgttcatagaggtgcttcttttacaaaaatgcgc
ataacaagcgtccggaaattgctgcccgagtcttggggcttcctttgccctgttcacaca
cctgatggggagccttgtggcttgctgaaccatatgacttctacatgccgcatttcatct
ttctatgattctgaaagaaaagttaaagattttcttaaaataaggatgtctattctgact
gttttggttggggttggaatgacacccttgctgccgaagcttgagcgggctggtcctcca
gaagttcttcatgttcttttagatggatgtgtcgtaggctcaattgcttctagcgaggtt
gagaaagctgtagcacacattcggagcttaaagctttcttctctgtcagggattcctgat
gatttggaggttggctatgtacccctgagtttgggtgggacctatcctggcttgtacctg
ttcacttctccatctagatttattcggcctgttagaaatgtatcccattcttcagacaac
aatcttaacattgagctgattgggccatttgaacaggcttttatggaaataagatgtgct
gatggtggacatggtggaagaagacaatccttccctgcaacacatgaagaaatccaccca
acaggaatacttagtgtagttgccaatctcactccttggtctgatcacaatcagagtcct
cgcaacatgtaccagtgtcagatggcaaagcagacaatgggtttttccgcccaagcttta
caatttcgtgcagatgtgaagtcatatcatcttcagactccacaatcaccaattgtgcgg
acagcttcatacagtaaatattgcatggatgaattcccgacagggacaaatgcaattgta
gcagttttggcatacacaggttatgatatggaggatgccatgatcttaaataagtcatct
gttgatcgtgggctatgtcgtgggcatatatatcagacggaatctattgacttaactaag
aatcatgacagagaagatcaagttttagaaatctttgccaggagcagtgataaaaccatg
aagtcttcaattgatacagatggccttccttacattggacaggtgatacacccaaatgag
cctttgtacagctcttataatacacttaccagtgtaacaaaacctacactgctgaagggt
tcagaaccagtgattgtcgactatgttagtgtggatggtgctacctcaaagaattacatg
caaaaggtgaatattcgtacccgccgcactaggtatcctataatcggtgacaagtttagc
agcagacatgggcaaaagggcgtctgctctcagttatggcctgacattgacatgccattt
tctgcagtcactggcatgcgaccagatctcattatcaatcctcatgcatttccttcaaga
atgaccattggaatgcttttagaatctattgcagctaagggaggaagtctgcatggaaaa
tttgtagacgcaacccctttccaaaactcagtcagtgaaaaggatgaggatggaccatct
aaagcaagctctctggttgatgagctgggtccaatgctagcctcctatggtttcaactat
catggagtagaggtcctatatagtggagtttttggtacagagttaacttgtgaaattttt
attgggcctgtttattatcaacgccttcgacacatggtctccgacaaattccaggttcgc
tctactggaaccgtggaccagatcactagacagcctattggaggaaggaaacgtggtgga
gggatccgttttggggagatggagcgtgactcagttcttgctcatggagctgcctacttg
ttacatgacaggcttcactcatgctctgattatcacatagctgaggtatgctctttttgt
ggaggtgttctcacagcatctgtcatccaacctcaaaagagggcaattcgagaaattcat
gggctccctcctgcaagaactcccaagagttacacatgtcatgcctgcaaaacaagcaag
ggaatggagacagtggcaatgccctatgttttcaagtatctagctgcagaattggcagca
atgaacataaaaatggagctccggttgagtaacagagcaggatgctga
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integrated database retrieval system
