Elaeis guineensis (African oil palm): 105042829
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Entry
105042829 CDS
T03921
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
egu04812
]
105042829
Cytoskeleton proteins [BR:
egu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105042829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_VPS8
PROPPIN
WDR54
Beta-prop_RIG_1st
MRP-S28
Motif
Other DBs
NCBI-GeneID:
105042829
NCBI-ProteinID:
XP_073112658
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Position
4:53528388..53583254
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AA seq
744 aa
AA seq
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MMTTKRAYKLQEFVAHASNVNCLKIGRKTSRVLVTGGEDRKVNLWAIGKPNAILRLSGHT
SAVESVNFDSSEALVAAGAANGTIKLWDLVEAKVVCTLTGHRSNCISVDFHPFGEFIASG
SLDTNLKIWDVRRKGCIDTYKGHSGGINAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLLH
DFKCHEGQIQCVDFHPHEFLLATGSADKTVKFWDLETFEMIGSSGPEQVEPYAGSGVVRL
NGHSESNSDTTSNQSLKIDSNIKTSMGRLSISQDSVNSIKTTMGRLLVSETVVKGTKPLI
SPGIPPGIPQRTGLSSALKMAATNSATAPGTAVLKTSSSKFDGTTNFQNINKSDVVPVIV
PRTSLRADVAADSRKEMDDVVHVPKTNSSIGLTLDRRKHVSNVFVITRTTQSKVTDLHKF
SNNRFDSERANVRFRYRSMGNKSTESNENVDCNLHPPINGFDHTSAGKRNLENVQITKAG
KAEENLSVDPQPSYLFQNNDPRLIKPREANSMEVLEGGRTQSLVMTWERREKSPSYEGPT
SSNSSQNISTGSINLTSRGHISSAGQEILSVSDEDAIADLMEQHKQFLTSSQSRLTKLQV
VRQLWDRNDLKGVIRAMEKISDYAVSADILSILMEKGHAITLDLYTCLLPLLASLLESKI
DRYTSISLEMLLKLIKIFGPVIHSALSAVPSVGVDLQAEERLEKCNLCFIELEKIKHIFP
SLTRRGGSIAESVQELNLTLQEVL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaccaagcgtgcctataagctacaggagtttgtagcacatgcttccaatgtg
aattgcctcaagattgggaggaagacttcaagggttcttgtcaccggtggagaagatcgc
aaggtcaatctctgggctatcggcaaacccaatgccatactgagactgtcaggccataca
agtgcagtcgagtcggtaaattttgattcatcagaagctttagtggctgctggggctgcc
aatggcacgataaagttgtgggatttagtggaggcaaaagttgtttgcactctaacaggg
cacaggtccaactgcatatctgttgattttcatccatttggagaattcattgcatctggg
tctttggatacaaacctaaagatatgggatgtccgaaggaagggatgcatcgacacatac
aaagggcacagtggaggaatcaatgcaattagattcaccccagatggccgatgggttgtt
tcaggtggagaagataacattgtgaagctctgggatctgacagctgggaagctcttgcat
gattttaaatgtcatgaaggtcaaattcagtgcgtagatttccatcctcatgagtttctt
ctggcaacaggttcagctgacaaaactgttaaattttgggatcttgaaacttttgagatg
attgggtcatcaggacctgagcaggttgagccttatgcagggtccggtgttgttagatta
aatggccattcagaatcaaactccgataccaccagtaatcagtcgctgaagattgacagc
aatataaagaccagtatgggaaggttatccatttcacaagattcagtaaacagtatcaag
actaccatgggaaggttattggtttcagaaactgtagttaaggggaccaaacctttaatt
tctccaggaattccccctggtattccccaaagaactggattaagctctgcgctgaaaatg
gctgcaacaaattcagctacagcaccaggcactgcagtgttaaagacaagttcatcaaag
ttcgatggaacaaccaattttcagaacattaacaagtctgatgtggtgcctgtcattgtc
cccagaactagcttaagagctgatgtggctgctgactctagaaaagaaatggatgatgtg
gtacatgtccccaaaaccaactcaagcataggattgactcttgatcgtcgaaaacatgtc
agcaatgtgtttgtcatcaccagaactactcagtcaaaggtgactgatttacacaaattt
tcaaataacagatttgattcagagagagcaaatgtacgatttcgatatagatccatgggc
aataagagcactgaatcaaatgaaaatgtagactgcaatctccatcctcctatcaatggc
tttgatcacacatctgctggaaaaaggaacctggaaaatgttcaaataactaaggctggg
aaggctgaagaaaacctatcagtggatcctcaaccgagttacttgtttcaaaataatgat
cctagattaattaaaccaagggaagcaaactccatggaagttctggaaggaggaagaaca
caatcactagtcatgacttgggaaaggagggaaaaatctcctagttatgaaggtcccaca
agcagtaattcttctcaaaatatatctactggtagcattaatttgacttcgaggggccac
atttcatcagctgggcaggaaatcttatctgttagtgatgaggatgctattgctgatttg
atggaacagcataaacaattcctaacttcttctcagtctcggttaacaaaattgcaggta
gttcgccagctttgggacaggaatgatctcaaaggtgtcattagggcaatggagaagata
tctgattatgctgtctctgctgacatactcagcattctgatggaaaaaggtcatgctatt
acactggatctttatacttgtctcttaccactccttgcaagccttttggagagcaaaatt
gatagatatacaagtatttctttggagatgctgctgaagcttatcaaaatattcggtcct
gtaatccactcagctctctcagctgttccatctgttggggttgaccttcaagcagaggag
aggctggaaaaatgtaatttatgttttattgagcttgaaaagatcaaacatattttccct
tctctcacaagaagaggagggtctatcgcagagtctgtgcaggagctgaacctcaccctt
caagaagtgctgtga
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