Elaeis guineensis (African oil palm): 105042956
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Entry
105042956 CDS
T03921
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105042956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105042956
Spliceosome [BR:
egu03041
]
Complex A
U1 snRNP components
U1 related factors
105042956
Complex B
105042956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
SMODS
Motif
Other DBs
NCBI-GeneID:
105042956
NCBI-ProteinID:
XP_073112441
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All DBs
Position
4:complement(37379540..37402696)
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AA seq
913 aa
AA seq
DB search
MASNPQSSGAQPLRPAVVGSTGPPQNFGPPMSMQFRPVVPAQQTHQFIPAASQQFRPVGQ
GVPGSNIGIPSGQTQMHHFPQAAQHLPPRSGPPAPPSSQAIPMPYVQPSRPMTSGSLQPQ
QNPQMPNSHLPNLGGIGMPLSSSYTFATSYGQPPNTVNTPSQYQPASQMQPPITPAVGQP
WSAPGTQNVPLVTPLVQAAPQSSATGAAGGTPATTNAQPRSSEQTSSDWQEHTSADGKRY
YYNKKTRQSSWEKPFELMTPIERADASTDWKEFSTSDGRTYYYNKVTKISKWIIPDELKL
AREQALRAAAQQAHTETGTASVAPVAPTVSSGEIPSTTTTSVIPGTTSAVASSFVPVAVN
SVISSSAMASVSPSVIPSPGILSSSSLGIPSTVGSSNLQTTITPLPAPISANTVVSTVAT
ESASSNTKSNHDSSSLLNTASVPDGASAQDLEEAKKAMPVTGKVNVTPMEEKTIDEEPLV
YSNKQEAKAAFKALLESANVESDWTWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRK
KQEAEERRIKQKKAREDFTRMLEECKELTSSTRWSKAGTMFENDERFHAVERPRDREDLF
ESYLVDLQKKERAKAAEEHKRNIMEYRAFLESCDFIKANTQWRKVQDRLEDDERCSRLEK
IDRLEIFQEYIHDLEKEEEEQRKIQKEQLRRQERKNRDEFRKLMEEHVAAGILTAKTHWR
DYCMQVKDLPSYIAVSSNTSGSTPKDLFEDVAEELEKQYHEDKAQIKEAIKIRKIALASS
WTFEDFKAATLGDDSLKGISETNMKLVFDELLERLREKEEKEAKKRQRLADNFSDLLYSI
KVFEHALKRCMKHWLTVIFLVSYMLIQIYLWIYVIHNCLVVFPQEIMLHLDGRTASHCLK
TAKSTGQLVMRML
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaatccacagtcttctggggcacagccccttaggcctgcagtggtgggctcc
acaggtccacctcaaaattttggtccaccaatgtctatgcagttcagacctgtggttccg
gctcagcaaacacatcagttcatcccagccgcttctcagcaattccgacctgttgggcag
ggtgttcctggttcaaatattggaataccttctggtcaaactcaaatgcaccattttcct
caagctgcacagcatttgcctccaagatcaggtccaccagcaccaccttcttcacaagca
attccaatgccatatgttcagccaagtaggcctatgacatctgggtcattgcagccccag
caaaatcctcagatgccaaacagtcatctgcctaatttaggtggcataggaatgcctctt
tcttcatcttatacgtttgcaacgtcctatggccagccaccaaatactgttaatacacca
tcccagtatcaaccagcatcccagatgcaaccacccattacacctgcagtgggacaacca
tggtctgcacctgggactcagaatgtacctcttgttacacctctggttcaggctgcacca
caatcttcagctacgggggctgcggggggcacacctgctacaacaaatgcacaacctagg
tcttctgaacagacctcttctgattggcaagagcacacatctgctgatggaaaaagatat
tattacaataagaagactagacaatctagctgggagaagccctttgagttgatgacacct
attgagagggctgatgcctcgactgattggaaggagttcagcacttcggatggacgaaca
tactattataacaaggtcacaaagatatcaaaatggataattcctgatgagctcaagtta
gctcgtgagcaagcattaagggctgcagcgcagcaggcacatacagaaactggaacagct
tctgttgccccagttgctccaactgtttcttctggggagatcccttccaccacaacaacc
tctgtgattcctggaacaacatctgcagtagcgtcaagctttgttccagtggcagtcaac
tcagttatatcatcatctgcgatggcttcggtatcaccatccgttataccatcacccgga
atcttgtcgagttcctccttgggaattccaagcacagttggctcatcaaatcttcagaca
accataacgccattacccgcacctatttctgctaacacggtggtgtctactgttgcaaca
gaatctgcatcatctaacactaagagtaatcatgacagttcatctctcctaaatactgca
agtgtgcctgatggtgcttctgctcaggatttggaggaagctaaaaaggctatgccagtt
actggaaaagtcaatgtcactccaatggaggagaaaacaattgatgaagaacctttggtt
tattctaataagcaggaggcaaaagctgcattcaaagccctactggaatctgcaaatgtt
gaatctgattggacttgggagcaggcaatgagagttattattaatgacaagagatatggt
gcattaaagacgcttggtgagaggaaacaagcatttaatgagtacttgggacaaaggaaa
aaacaggaagctgaggaaaggcgcattaaacaaaagaaagcacgggaagacttcaccaga
atgttggaggaatgcaaagaattaacttcgtcaacccggtggagtaaagctgggaccatg
tttgagaatgatgaacggtttcatgctgttgagcggccaagagatcgtgaggatctattt
gaaagctatttggtggatctccagaaaaaggaaagagcaaaggctgctgaggagcataag
cgaaacataatggagtatagagcttttcttgaatcatgtgactttatcaaggcaaacacc
caatggaggaaagttcaagatcgactggaggatgatgaaagatgttctcgacttgaaaaa
attgatcgtttggagatcttccaggagtatatacatgatctggagaaggaagaggaggag
cagcggaagatacagaaggagcaattaagacggcaggaacgcaaaaaccgtgatgagttt
cgcaaattaatggaagaacatgttgctgctggaattcttacagctaaaactcactggcgt
gattactgtatgcaggtgaaggatttgccttcttacatagcagtatcatcaaacacatcc
ggttcaacaccaaaagatctgtttgaggatgttgcagaggaactcgaaaagcagtaccat
gaggacaaggcccagatcaaagaagcaattaagatccgaaagattgctttggcatcttca
tggacatttgaagatttcaaggctgccactttgggtgatgatagcctaaaaggaatttct
gagacaaacatgaagcttgtttttgatgagttactggaaaggcttagggagaaagaggag
aaggaggctaagaagcgccaacgtcttgcagataatttctctgacctgctttactcaatt
aaggtatttgagcatgctcttaagagatgtatgaagcattggttgacagtgatatttctg
gtctcatatatgttgatacagatatatttatggatatatgttatccataactgtttggtt
gtcttcccccaggaaataatgcttcatctagatgggaggactgcaagtcactgtttgaag
acagccaagagtacaggtcaattggtgatgagaatgttgtaa
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