Elaeis guineensis (African oil palm): 105043153
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Entry
105043153 CDS
T03921
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egu03000
]
105043153
03036 Chromosome and associated proteins [BR:
egu03036
]
105043153
Transcription factors [BR:
egu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105043153
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105043153
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
105043153
NCBI-ProteinID:
XP_010918888
UniProt:
A0A6I9R1P0
LinkDB
All DBs
Position
4:complement(29252207..29299056)
Genome browser
AA seq
1553 aa
AA seq
DB search
MEGPETEQLQLKKMEVIILEEQQEQEGMAKECKEEELFEEGHKRGRDVHIKKHEEKKNDE
CIKEHEEKKKDIEMEKPWNSDEDVRSDSYEMFVDDLDSEQASTSDNDDESNSEVPLTDAE
VEELIAEFLEVESKAAEAQESLEKESLARVESEVRAELAENLHGDALEMAISTEMKTFRE
EWEAVLDDLETRSALLSEQLDGAGIELSSLYKYIESQVPNGCCTEAWKKRAHWVGSQVTN
EVNQSIREAEEYLQSCRPVRRRHGRLLEEGASGFLERTLSIKDKDNLAVNSEKDWSKFDE
LIQSHGCSGSTSFGSKNWASVYLASTPQQAAELGLKLPGVDEVEEIGEIEGNINDPLYAA
AIANEKEIELSEEQRRKYRKVREEDDVQITMKLQRHLKRRRNKNIQESIEKDVPDGSSLS
NECPQPVSEKPSLSENSVANVDGTDIFIQNLESQAVISNGSKNEKLMFNGTWKRSHENED
AAIDNKRSRTVIIDSDDEVQELDSKSVSHAPSREQDSPSHVRKEVDIIDVDVLPSPCPKD
ISRNFRCTACSDVLKASEVHRHPLLDVIICGNCKFLVVEKRRLEDPVLGGYCRWCGKGDD
VINCNSCKILFCAACIARNFGEERLSEAKTSGWQCCCCSPTLLHGFILDCEKAIGGLVVF
SSDSDSDSELSGGQMDVTISNRKRQKRKIRRILDDAELGEETKQKIAMEKARQEHLKSMQ
AQSAGKLCHKSPAYVNGDATEVAMGVADDGYIVNVAREEDEEPVRIPRSISAKLKPHQVA
GIRFMWENVIQSVKKVRSGDRGFGCILAHTMGLGKTFQVIAFLYAAMRTSDLELKTALIV
TPVNVLHNWRQEFVKWKPEEGKPLRVYMLEDVTREKRAYLLSKWRIKGGVLLIGYAAFRN
LSLGKHVKDRHAASEICNALHYGPDILVCDEAHMIKNTRADITQALKQVKTQRRIALTGS
PLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNSTLNDVKIMNQRSHILYE
QLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKKFLDVHGFTSDKVSSEKTIRR
SCFFAGYQALAQIWNHPGLLQMAKEHRDSLRREDAVENFLVDDSSSDDNMETDLTNGEKQ
RMKNGSLHKKSDTIFCHEENDWWEDLLNEKIYREVDYSGKMVLLLDILSMSSEAGDKALV
FSQSLTTLDLIELFLSKLPRKGREGKYWKQGKDWYRLDGSTQCAERQKLVERFNEPTNRR
VKCTLISTRAGSLGINLHAANRVIVVDGSWNPTYDLQAIYRVWRYGQNKPVYAYRLMAHG
TMEEKIYKRQVTKEGLAARVVDRQQIHRTMSKEEILHLFDFGEDENSDMLEQKQENQVLP
NQYKTGEIGYSWGQKSLPLSHGACCTDKIMESIFSRHYPRWIANYHEHETLLQENEAERL
SKEEQDIAWQTYQRSLEWEEVHRTVFEDSERKLVADDHVKKKLVADDALPESSVPRQTKG
SSRSRPINQRKCTNLAHLLTLRSQGTKSGCSTICGECAQEISWENLNRDGRSR
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcctgaaacagaacaactgcagctgaagaaaatggaagttataatattagaa
gaacaacaagagcaggagggtatggccaaggaatgtaaagaggaggaactttttgaggag
ggccataaaaggggaagagacgttcatatcaagaagcatgaagaaaaaaagaacgatgag
tgtataaaggagcatgaagaaaaaaagaaggatatagaaatggaaaaaccatggaacagt
gatgaagatgtacgaagcgactcttatgagatgtttgttgatgatttggatagtgagcag
gcatcaacatctgacaatgatgatgaatcaaattccgaggtgcctttaactgatgcagaa
gttgaagaacttatcgcggagtttcttgaagttgagagtaaggcagcagaggcacaagag
tcacttgagaaagagtcacttgcccgagtggaaagtgaagtaagagcggagctagctgag
aatcttcatggggatgcactggaaatggctatttcaactgaaatgaaaacattcagagaa
gaatgggaggctgttcttgatgatttagagactcgaagtgctctcttgtcggaacaactt
gatggggcaggcattgagctttccagtctttacaaatatattgaaagtcaagttcctaat
gggtgttgtacagaagcttggaagaaaagggctcactgggtaggctctcaggtcacaaat
gaagttaaccaatcaattagagaagctgaagaataccttcaatcctgtcgacctgtaagg
agacgacatggtcggctgttggaagaaggtgctagtggctttctagaaagaacactatcc
atcaaagataaggacaatcttgcagtaaattctgagaaagattggagtaagtttgatgag
cttattcaatctcatggctgctcgggaagtacttcgtttggtagcaagaattgggcatct
gtttaccttgccagtactccccagcaagctgcagaattgggcctcaagttgcctggagtt
gatgaggtagaggagattggcgaaattgagggcaatattaatgatcctctctatgctgct
gcgattgcgaatgaaaaggaaattgagctctctgaagaacaaaggagaaagtatagaaag
gtaagagaagaagatgatgtacaaataacgatgaaactgcaacgtcatttgaagagaagg
agaaacaagaatattcaggaatctattgagaaagatgtcccagatggttcttccttgtca
aacgagtgtcctcagccagtttctgagaagccaagcttatccgaaaatagtgttgccaat
gttgatggtaccgatatttttattcaaaatttggaatctcaagctgttatttctaatgga
agtaaaaatgaaaagttgatgtttaatggcacttggaagcgttcacatgaaaatgaagat
gctgccattgacaataaaaggagtcgaactgttataatagacagtgatgatgaagtgcag
gagttggacagcaaatctgtttctcatgcaccaagtagggagcaagattcaccttcgcat
gttaggaaagaggttgacattatagatgttgatgtcctaccttctccctgtccaaaagac
atttccagaaattttcgctgtactgcatgttctgatgtattgaaagcttctgaagtgcac
aggcatccactcttggatgtcataatctgtggtaactgcaaatttctggtggtggagaaa
aggcgacttgaggatcctgtgttaggtggttactgcagatggtgtggaaaaggtgatgat
gttataaattgcaactcatgtaagattctattctgtgctgcatgtatagccaggaatttt
ggtgaagagcgcttatcagaagctaaaacctctggttggcagtgctgttgctgctcacca
actctgttgcatggatttattttagattgtgaaaaagccattggaggtcttgtggttttt
agctctgatagtgatagtgattcagagttatccggtggtcaaatggacgttacaatcagc
aataggaagagacaaaaaaggaagattcggagaatcctagatgatgcggaacttggagaa
gaaaccaagcaaaaaattgcaatggagaaggctaggcaagaacatctgaaatcaatgcaa
gctcaatcagctggcaaattatgtcataagagtccagcatatgttaatggagatgcaaca
gaagttgccatgggtgttgcagatgatggctatatagtgaatgtagccagggaggaagat
gaggaaccagtgaggattccaaggagtatttctgcaaagttgaaaccccaccaggttgca
ggaatacgattcatgtgggagaatgttatacagtctgtcaaaaaggtcagatctggggat
agaggttttgggtgcatattagcccataccatgggtcttgggaaaacttttcaggtcatt
gcttttctatacgctgctatgagaacttctgatttagaattaaaaactgcacttatagtt
acaccagttaatgtacttcataactggcggcaagaatttgtgaaatggaaacctgaggaa
ggaaagcctcttcgtgtgtacatgttggaagatgttaccagggagaaaagagcatatttg
ctttcaaaatggagaatcaaaggtggagttcttctaataggctatgctgctttccgaaac
ttgtcacttggaaagcatgtgaaggatcggcatgcggccagtgaaatttgcaatgccttg
cattatggacctgatatacttgtatgtgatgaggcccatatgatcaagaatacaagagct
gatatcacccaggctttgaaacaagtgaagacacaaaggagaatagcattaactgggtca
cccctgcagaacaatttgatggagtattattgtatggttgattttgtaagggaaggatat
ctgggaagtagtcatgaatttcgaaaccggttccaaaaccccatagaaaatgggcagcac
acaaattccactttgaatgatgtaaagattatgaaccaaaggtcacatattttatatgaa
cagcttaaaggatttgtccagaggatggacatgaatgtggttaagaaggacctccctccc
aaaactgtttttgtcatcactgtaaagctttctccattgcagaggaagttgtacaaaaaa
tttttagatgtgcatggatttacaagtgacaaagtttcttctgaaaaaacaattaggcgg
agttgcttctttgctggttatcaggcactggctcagatatggaaccatcctggtctcttg
caaatggccaaagaacatagagattccttaagacgagaagatgctgttgagaactttctt
gtggatgacagctctagtgatgataacatggaaactgacttaacaaatggagagaagcag
aggatgaaaaatggttccttgcataagaaaagtgatacaattttttgtcatgaggaaaat
gactggtgggaggatcttctaaatgaaaagatatacagggaagttgattacagtggtaaa
atggttttactacttgatatcctctccatgagttctgaggctggtgataaggcattagtg
tttagccaaagcttgacaactctagatttgatagagttgtttctatcaaaattgccaagg
aaaggaagagaaggcaagtattggaagcaaggcaaggattggtataggctagatggaagc
acacagtgtgccgaaaggcagaagcttgtggagagatttaatgagcccacaaatagaagg
gtgaaatgtacacttatatcaacacgggctggatccctgggcatcaaccttcatgctgct
aaccgtgttattgttgttgatggttcatggaatccaacctatgaccttcaggctatttat
cgtgtttggagatatgggcaaaacaaacctgtctatgcttaccgtttgatggcacatgga
accatggaagaaaagatatataaacggcaggtgacaaaggaaggactcgctgcaagggtg
gtggatagacaacaaatacatagaacgatgtccaaggaagaaatattgcacctttttgac
tttggtgaagatgaaaattctgacatgcttgaacagaaacaagaaaatcaagtcttaccc
aatcagtataaaactggtgaaattggatactcatggggacagaaatccttgcctctttct
catggagcttgctgtactgacaagatcatggaaagcatctttagcagacattatccccgc
tggattgcaaactaccatgaacatgagacccttttacaagagaatgaagcagagagacta
tcaaaagaggagcaagacatagcctggcagacttatcaaagatcattggagtgggaagag
gtccacaggacagtttttgaggattctgagagaaaattggttgcagatgaccatgtcaag
aaaaaactagttgcagatgatgctcttccagagagtagcgttcctcggcaaaccaagggc
agctcaagaagccgccccattaaccaaaggaagtgtaccaacctggctcatttgctaaca
ttgagaagccaaggcactaaatctggctgcagcaccatttgtggagaatgtgcacaggag
ataagctgggagaacctcaacagagatgggaggtctaggtga
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integrated database retrieval system