KEGG   Elaeis guineensis (African oil palm): 105043621
Entry
105043621         CDS       T03921                                 
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105043621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egu04121]
    105043621
Enzymes [BR:egu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     105043621
Ubiquitin system [BR:egu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105043621
  Multi subunit type E3
   ERAD complex
    105043621
   LMBR1L-GP78-UBAC2 complex
    105043621
SSDB
Motif
Pfam: TPR_SYVN1_N zf-RING_2 zf-C3HC4 CUE zf-rbx1 zf-RING_11 zf-RING_UBOX zf-C3HC4_2 zf-ANAPC11 zf-C3HC4_3 zf-RING_16 E3_UbLigase_EDD zf-RING_5 zf-C3HC4_4 zf_RING_Vps8_fungal zf-RING_Vps41 RINGv PHD
Other DBs
NCBI-GeneID: 105043621
NCBI-ProteinID: XP_010919530
UniProt: A0A6I9R4K3
LinkDB
Position
4:17553684..17587490
AA seq 578 aa
MAVNYLYASAISTVTNLVGLQWWTVSLLDGMKSDGVVDGNEVGSRSVGPALELLLDSHVT
IALLASFVLNLFILVILCLKTIFFVQLYPSETRKVLERLINYVIYKGTFLPLVVPPNMFQ
VVFWSGWLVFLCFLKMFQSLARDRLERLNASPTATPSKYFRVFSALLLVLFADLLWIKLC
IMIYKSSSSSLFVLLFFEPLGIAFETSQAIMVHGFQLLEIWQRYSIDSDGNCLGSDTSYK
AAAGTLSEWKGVLIRNCGFLLEMMTFLTAVGHYLIIWWLHGMAFRLVDTVLFLNLRALLS
TIVKRVRAYIKLRKALSSLNGALPDATYEEICAFDDECAICRGPMARAKKLPCNHLFHLA
CLRSWLDQGLTEVYSCPTCRRPLFQCNPQDRTSSNAGELANVAQLAEHLNLGLNPQRISG
QPVPNQQQNPSDTMWRGVGFDSGWMPPWPNQRMDGAGTSGAIRSVGLSGVQMMVRQLTSV
GENYGHGSLDDAAWNLWPNQHASGSSVPPSSPLRYTTNTDGLRFRNISNPVNGNMSEILT
MVDRVREVLPHVPDELIIQDLLRTNNINITVNNLLLLQ
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcggtgaattacttgtacgcctcggccatcagcacggtgaccaaccttgttggtttg
caatggtggacggtctcgctgcttgatggcatgaaatctgatggcgtagttgatgggaat
gaggttggctcgaggagtgtggggccggcgctggagctgctcttggactcgcatgttacc
attgcgttgctggcgagttttgtgctaaatttgttcattcttgtcatcctgtgcctcaag
actatattctttgttcagttgtatccttcagagactcgaaaagtactggaacgccttatt
aattatgtaatatacaagggaacttttcttccactggttgtaccacctaatatgtttcaa
gtggtcttttggtcaggatggctggtctttctttgtttcctaaagatgtttcaatcattg
gccagagatcggcttgagcggttaaatgcatcccctactgcaacaccttcaaaatatttt
cgtgttttttctgccttgttgcttgttctgtttgcggacctcctatggataaagctgtgc
attatgatctataagtcatccagttctagtttatttgttctcttgttcttcgagcctctt
ggtattgcctttgagacatcacaggctatcatggtacacgggtttcagttgcttgagatt
tggcaacgatattccattgacagtgatggtaattgcttgggctccgatacttcttacaaa
gcagcagcaggaactttatctgaatggaagggtgttctcattcgaaattgtggttttctc
ctagagatgatgacttttttgacagcagttggtcattacttaatcatctggtggcttcat
ggcatggcatttcgtctggtggatacagtccttttcttaaacttgcgtgctcttttaagc
acaattgtgaagcgggtcagggcatatatcaagttaaggaaggcattaagttctctcaat
ggagcacttcctgatgctacatatgaagagatttgtgcgtttgatgatgaatgtgctatc
tgcagaggaccaatggctagagcgaaaaagctaccctgcaatcacctttttcatcttgcg
tgcttgaggtcttggttagatcagggcttaactgaagtatattcttgccctacatgtcga
aggcctctttttcaatgtaatcctcaagatcgcactagctctaatgcaggagagcttgcc
aatgttgcacaacttgctgaacatttaaatttgggattgaacccgcaaagaatatctgga
caacctgttcctaaccagcaacagaatccttctgatacaatgtggaggggagttggtttt
gattccggttggatgcctccatggccaaatcaacgaatggatggtgctggtacttctggt
gcaatcagatcagttgggcttagtggagtccagatgatggtgaggcagctgacatccgtc
ggtgagaactatggtcatggttcattagatgatgctgcttggaacttgtggcctaatcag
catgcctcaggctcctccgtccctccatcctccccacttaggtatactacaaatactgat
ggcctgcggtttagaaacatttcaaaccccgtaaatggaaacatgtcggagatactcact
atggtagatcgagttcgagaagttttgccccatgtacctgatgaactaattattcaggat
ttattacgaaccaacaacatcaacattactgtgaataatcttcttctacttcagtaa

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