Elaeis guineensis (African oil palm): 105043621
Help
Entry
105043621 CDS
T03921
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105043621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105043621
Enzymes [BR:
egu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
105043621
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105043621
Multi subunit type E3
ERAD complex
105043621
LMBR1L-GP78-UBAC2 complex
105043621
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
E3_UbLigase_EDD
zf-RING_5
zf-C3HC4_4
zf_RING_Vps8_fungal
zf-RING_Vps41
RINGv
PHD
Motif
Other DBs
NCBI-GeneID:
105043621
NCBI-ProteinID:
XP_010919530
UniProt:
A0A6I9R4K3
LinkDB
All DBs
Position
4:17553684..17587490
Genome browser
AA seq
578 aa
AA seq
DB search
MAVNYLYASAISTVTNLVGLQWWTVSLLDGMKSDGVVDGNEVGSRSVGPALELLLDSHVT
IALLASFVLNLFILVILCLKTIFFVQLYPSETRKVLERLINYVIYKGTFLPLVVPPNMFQ
VVFWSGWLVFLCFLKMFQSLARDRLERLNASPTATPSKYFRVFSALLLVLFADLLWIKLC
IMIYKSSSSSLFVLLFFEPLGIAFETSQAIMVHGFQLLEIWQRYSIDSDGNCLGSDTSYK
AAAGTLSEWKGVLIRNCGFLLEMMTFLTAVGHYLIIWWLHGMAFRLVDTVLFLNLRALLS
TIVKRVRAYIKLRKALSSLNGALPDATYEEICAFDDECAICRGPMARAKKLPCNHLFHLA
CLRSWLDQGLTEVYSCPTCRRPLFQCNPQDRTSSNAGELANVAQLAEHLNLGLNPQRISG
QPVPNQQQNPSDTMWRGVGFDSGWMPPWPNQRMDGAGTSGAIRSVGLSGVQMMVRQLTSV
GENYGHGSLDDAAWNLWPNQHASGSSVPPSSPLRYTTNTDGLRFRNISNPVNGNMSEILT
MVDRVREVLPHVPDELIIQDLLRTNNINITVNNLLLLQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaattacttgtacgcctcggccatcagcacggtgaccaaccttgttggtttg
caatggtggacggtctcgctgcttgatggcatgaaatctgatggcgtagttgatgggaat
gaggttggctcgaggagtgtggggccggcgctggagctgctcttggactcgcatgttacc
attgcgttgctggcgagttttgtgctaaatttgttcattcttgtcatcctgtgcctcaag
actatattctttgttcagttgtatccttcagagactcgaaaagtactggaacgccttatt
aattatgtaatatacaagggaacttttcttccactggttgtaccacctaatatgtttcaa
gtggtcttttggtcaggatggctggtctttctttgtttcctaaagatgtttcaatcattg
gccagagatcggcttgagcggttaaatgcatcccctactgcaacaccttcaaaatatttt
cgtgttttttctgccttgttgcttgttctgtttgcggacctcctatggataaagctgtgc
attatgatctataagtcatccagttctagtttatttgttctcttgttcttcgagcctctt
ggtattgcctttgagacatcacaggctatcatggtacacgggtttcagttgcttgagatt
tggcaacgatattccattgacagtgatggtaattgcttgggctccgatacttcttacaaa
gcagcagcaggaactttatctgaatggaagggtgttctcattcgaaattgtggttttctc
ctagagatgatgacttttttgacagcagttggtcattacttaatcatctggtggcttcat
ggcatggcatttcgtctggtggatacagtccttttcttaaacttgcgtgctcttttaagc
acaattgtgaagcgggtcagggcatatatcaagttaaggaaggcattaagttctctcaat
ggagcacttcctgatgctacatatgaagagatttgtgcgtttgatgatgaatgtgctatc
tgcagaggaccaatggctagagcgaaaaagctaccctgcaatcacctttttcatcttgcg
tgcttgaggtcttggttagatcagggcttaactgaagtatattcttgccctacatgtcga
aggcctctttttcaatgtaatcctcaagatcgcactagctctaatgcaggagagcttgcc
aatgttgcacaacttgctgaacatttaaatttgggattgaacccgcaaagaatatctgga
caacctgttcctaaccagcaacagaatccttctgatacaatgtggaggggagttggtttt
gattccggttggatgcctccatggccaaatcaacgaatggatggtgctggtacttctggt
gcaatcagatcagttgggcttagtggagtccagatgatggtgaggcagctgacatccgtc
ggtgagaactatggtcatggttcattagatgatgctgcttggaacttgtggcctaatcag
catgcctcaggctcctccgtccctccatcctccccacttaggtatactacaaatactgat
ggcctgcggtttagaaacatttcaaaccccgtaaatggaaacatgtcggagatactcact
atggtagatcgagttcgagaagttttgccccatgtacctgatgaactaattattcaggat
ttattacgaaccaacaacatcaacattactgtgaataatcttcttctacttcagtaa
DBGET
integrated database retrieval system