Elaeis guineensis (African oil palm): 105043668
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Entry
105043668 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egu04131
]
105043668
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egu04147
]
105043668
Membrane trafficking [BR:
egu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105043668
Exosome [BR:
egu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105043668
Exosomal proteins of bladder cancer cells
105043668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Fis1_TPR_C
Zn_ribbon_19
zf-CHCC
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
105043668
NCBI-ProteinID:
XP_010919612
UniProt:
A0A6I9R311
LinkDB
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Position
4:16315320..16320505
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHDEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILTAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDTLFYVKDRFLRFYEFSSQKDNQVVPIRRPG
SVSLNQGPRTLSYSPTENAVLLCSDVDGGSYELYIVPKDSAGRGDYMQEAKKGAGGSAVF
VARNRFAVLDKSNNQALVKNLKNEIVKKSLLPVVTDAIFYAGTGNLLCRAEDRVVIFDLQ
QRLILGELQTPSVKYIVWSSDMESIALLSKHAIVIASKKLVHRCTLHETIRVKSGAWDEN
GVFLYTTLNHIKYCLPNGDSGIVRTLDVPVYITKVSGSNIYCLDRDGRNRVISIDATEYI
FKLALLRKRYDHVMSMIRNSQLCGQAVIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDYWYRLGIEALRQGNTSIVEYAYQRTKNFERLSFLYLVXGNMEKLSK
MLRIAEIKNDVMGQFHNAMYLGDIEERVKILENAGHLPLAYVTAATHGLTDVADRLAAEL
GDNVPSIPEGKVSSLLMPPRPLMCSGDWPLLRVMRGIFEGGLDSLGRTGNEEEEEASGAD
WGDEDLDIVDVEGVIQNGDIVAEVEDGEANEENDEEGGWDLEDLELPPDVDTPKANPNAR
SSLFVAPTPGMPVSQIWIQKSSLAGEHVAAGNFDTAMRLLSRQLGIKNFAPLKPLFMDLY
VGSHTYLRAFATVPVISTAVEKGWNESASPNVRGPPALVFKFSQMDEKLKAAYRVTTEGK
FPEALRQFLSILHTIPLMVVDSRREVDEVKELIEIAREYVLGLKIEVKRKEMKDNAIRQQ
ELAAYFTNCKLQKIHMRLVLASAMSSCYRGGSFATAANFARMLLENSPPEAQAKKARQVL
QACGDKKDTNQLNYDFRNPFVVCGATFVPIYRGQKDVSCPYCGARFVPAIEGQICAVCEL
AVVGADASGLLCSPTQTR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagacgaagagcaatcgggtgaaggggctgagctttcacagcaag
cggccctggatcctcgccagcctccacagtggcgtgatccagctatgggactaccggatg
ggcaccctcatcgaccgattcgacgagcacgatggacccgtgcgcggcgttcacttccat
aaatctcagccccttttcgtctcgggaggagatgattacaagatcaaggtctggaattac
aagacccatcggtgcctatttacccttcttgggcatcttgattacattcgtacagttcaa
tttcacgatgagtatccatggattgttagtgctagtgatgaccagactattagaatctgg
aactggcagtctcggacatgcatttcagtgttaacagggcataaccactatgttatgtgt
gcctctttccatccaaaggaggacctggttgtatcggcttccctggatcagacagtccgg
gtatgggatattggtgcattgaggaagaaaacagtgtcaccagctgatgacatcttgcgc
ctgagccagatgaacacggatctgtttggtggcgttgatgctgttgtcaagtatgtcttg
gaaggtcatgatcgtggagtcaattgggcatcgtttcatcctagcctgcctctcattgtg
tcaggagcagatgatagacaagtgaaactatggcgaatgaatgatacaaaggcttgggaa
gtggacacgctgagagggcacatgaataatgtctcttgtgtaatgttccatgcgaagcag
gatattatcgtgtcaaactcagaggacaaaagtattcgcatttgggatgccacgaaacgc
actggaattcagacatttcgccgtgaacatgaccgtttctggattctcactgcacatcca
gaaatgaaccttcttgcagctggtcatgacagcggtatgattgtttttaagttggaaaga
gagcgccctgccttctctgtgagtggagatactctcttctatgtcaaagatcggttcttg
cggttctatgagttttcatcccagaaggataatcaagtggttccaatcagaaggcctggt
tctgtcagcttgaatcagggacccagaacactgtcctacagccctacggaaaatgctgtc
ttgctctgctctgatgtggatggtggttcatatgaactttatattgttcccaaagattct
gctggaaggggtgattatatgcaggaagcaaagaagggagctgggggctcagctgttttt
gtagctcgcaacaggtttgcagttctcgacaagagtaacaatcaagcattggtgaagaat
cttaagaatgagattgtgaagaagagtcttcttcctgttgttactgatgcgatattttat
gccgggacaggcaatctgttgtgcagggcggaggatagagtggtcatatttgatctccaa
cagaggcttattcttggggaacttcagaccccatctgtcaagtacattgtttggtcaagc
gacatggagtctattgccttgttgagcaaacatgcaatagttattgctagcaagaaactt
gtacaccgctgcacacttcatgagacaatccgtgtgaaaagtggtgcctgggatgagaat
ggcgtctttctttatacaaccttaaaccatattaagtactgtcttcctaatggggacagc
ggaatagttagaacccttgatgttcctgtttacataaccaaggtttctgggagcaatatc
tattgcttggatcgtgatggtaggaatagggttatatcaattgatgctacagaatacata
ttcaagcttgcccttctgcgaaaaagatatgaccatgtgatgagcatgatcaggaattca
cagttatgcggacaggctgtgatcgcatatctgcaacagaaaggtttccctgaagtagct
ctccattttgtcaaagatgagagaacccgattcaaccttgctcttgagagtggtaacatc
cagattgctgttgcttccgcaaaggagatagatgagaaagactactggtacaggttaggc
attgaggctcttcgacagggaaacaccagtattgtggaatatgcataccagaggacgaag
aactttgagaggctgtcttttctctatcttgtanacggaaacatggaaaagctgtccaaa
atgttgaggatagctgagattaaaaatgatgtgatgggccagttccacaatgcgatgtat
ctaggtgacattgaggaacgtgtcaagatcttggagaatgctggccatttgcctcttgca
tatgtcacagctgccactcatgggcttactgacgtagcggacaggcttgcagctgaattg
ggagataatgtcccctctatacctgaaggaaaagtcagttctctccttatgccacctcga
ccgcttatgtgcagtggggattggccattattaagggtcatgagaggtatttttgaaggt
ggattggatagtcttgggaggacaggcaatgaggaagaagaagaagctagtggtgctgac
tggggtgatgaggatttggacattgttgatgttgaaggtgtgattcagaatggcgatatt
gtagcagaagttgaggatggtgaagccaatgaagagaatgatgaggaaggaggttgggac
cttgaagatttggagctaccgccggatgtggatacaccgaaagctaaccccaatgctcgt
tcatctttgtttgttgctcctacaccaggcatgccagtaagtcaaatatggattcagaaa
tcatctctggcaggggagcatgtggctgctggaaattttgatactgccatgcgcctgctt
agccggcaattgggaataaagaactttgctcccttaaagccattgtttatggatctttac
gtgggtagccacacatatcttcgtgcttttgctacggtgcctgtgatatcaactgctgtt
gagaagggatggaacgagtctgccagccctaatgtgaggggtccaccagcacttgttttt
aagttttctcagatggatgagaagcttaaggctgcttaccgtgtcacaacagagggaaag
tttccagaggctttgcggcagtttctcagtatcctgcatactatcccacttatggtggtg
gactcaaggagggaagttgatgaagtgaaggagcttattgagatagccagagaatatgtc
ctgggcttgaagattgaagtcaaaagaaaggaaatgaaggataatgcaattcggcagcag
gagttagcagcttacttcaccaactgtaaacttcaaaagattcatatgagacttgtgctt
gcaagtgcaatgagtagctgttacaggggagggagcttcgctacagcagcgaattttgct
aggatgcttttggagaatagcccacctgaagcccaagcgaagaaggctaggcaggtgttg
caggcctgtggtgataagaaggatactaatcagctgaattatgatttcaggaacccattt
gtggtttgtggggctacttttgttcccatctaccgtgggcagaaggatgtttcctgccca
tattgtggggctcgctttgtgccagccatagaggggcagatttgtgctgtttgtgagctt
gcggtggtgggtgcagatgcatcaggcctgctctgttctcctacacagacaagatag
DBGET
integrated database retrieval system
