Elaeis guineensis (African oil palm): 105043717
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Entry
105043717 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105043717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105043717
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105043717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
ARM_At3g06530
BP28CT
U3snoRNP10
Motif
Other DBs
NCBI-GeneID:
105043717
NCBI-ProteinID:
XP_010919682
UniProt:
A0A6I9R4X7
LinkDB
All DBs
Position
4:15463370..15499397
Genome browser
AA seq
2180 aa
AA seq
DB search
MASSIASQLQAIKSVLKGAPDAIRRPRTRPSVIFDPKEAADIDLRTILPIALSGLEVLVD
LDGRFRKYEGTLFSQTSLELDREKMVPKEEEKINKSIHSYLRLLSGHLQLPAALKTLEYL
VRRYQVHVFNMDELVLCALPYHDTHAFVRIVQLLDLGNNKWAFLEGIKNSGAPPPRQVIV
QQCIRDKGLLEILCNYASPTKDFQHSRPVVCFCTAVIVEALGVIPELDTDTVQRVLGFVF
NGLNPTMRGGRDDKAGALMVVGLLATRATLAPKLSQNLVLFIARMAQHDANQSVDLPWLR
VMIMAIISLVQSQSMQLFPKKTLMFLKDIRDLPGVLSGLSSEFNIQGFLGLYLGSLIEYS
TSDDSCCITLINMLEALALKDFVGKIVSKVLSYCMKLSRGLENSSLCEAGIWAKKILVVV
GKHYPCELRGAIHKFLESSKINACDEQSILETLSQLFDGSLDIPMEISDPKLWFSLEHPK
VAVRQATLSNIAASGMLKSMAANPQKVINLTNAIIRGLHDDDLRVVEAALSVDGLVGLVE
APCLLKAYHHVLSRCTDILYNSTSKTSRACNIAVSCLERLVVEFRSLHIDCSKEIATTLF
PLLLVVPKTWRVNLKALELVKQVEWPFYIESSIAYDSTFFDQMKNLEFAHATSINMKTIG
ALAEMFATNPEEHMQWLVECSNCGALSKSLFFLIMLQALKVQNEESGSLLKLYQACFSAL
KNEWHEMEPQGGVSFVDELNLDKLDKPCIGFVDQLLHADVDILNLKILICIFWSLLKRYV
EIIKQNTMAETDEWLSILNELFIFFVTSPSKNVFKRHLQFLVTSCSKAPCWFLSKYFAEE
GVPVEIQVESLLLFSTLCSMSELSEDGMDENSHLQHLLGFPSLLIPLSNENKDVRTAAVN
CVEGLYKMWRLFDVSRLRNGNDTILSRCVSSPTFGDFLESIVSQKKLISSDGNFLSSYLT
SMLSLSDHNFLVPDSIHNRFDQPTKDAILLFILSSTLRFSSYGKLVVLSLLKGXGNIILH
VGGVKSLLFELLERRNKYHFGLDKVQQKLSKTEIETLCLLLEVCVPVSSSAHIDADMVDC
LIKALRVDALSPDDAAVVRPCVTVLQSLTPAMYGSLKTEIQDQLFGNLVFLFRNDNGDIR
NAAREALLRININCSTIVRFLELILSQDHELGSSKRVKRKKNLIHFSFGISQDTFSKEEP
TLSILVSFLDILLLKKNIKKRESLVQLLFQALEKLFSNDWLLGLIGQGEKGSGALSEVPE
SLISAVYQAQQITLLVLKDITDSLILDHPIKDDMFDKVNMNLLIECAHTAKDVASRNHVF
LLLSSVAKVSSRWVSEHIVDIFTVIGESAVKQNDSHSQQVLEDMISTLVPRWLSKTNSVG
ELLQIFIKALPDVIEHRRLTLMVYLLRTLGEEGSLGVLVVYLFHSLASRITKFPSKHLRD
WHDLSSSSFILNEWEYEFAAQIFDQYSCKIWFPCLVKVLQEIRVHSEQEGLLHELYLAMQ
FILYKMHDTELVFELESGQDRDCLQITLGELMEQVVLHSQLVTVRRKQVSVTSDIIKAFK
DCANRVLKTITRWMLPSAYFKGITQLLGHADGSVKRKTLGLLSETVKHHSLVQKNPKEMK
KMKQKFMAFPLHIDESSAPSFNELCLKIVELIDNTTDGSDSPMKLAAVSSIEIMAKEFPS
DNLIYATCLTVIVKHIGSDNSTLSSGCIRTTGALISVLGSKALSQLPLLMKHMIARAHEI
SNCPIGNFKHNLVDVSQEVTSHKVSLLLSILVTLEAVVEKLGGFLNPYLADILDLLVLHP
EYASELDMKMKLKAATVRKLLSEKIPARLMLTPLLQIYSSSLKCGELSLCLVFEMLSSMI
GAMDRSSIVTYHAKLFEQCLMALDLRRQHPESVRNINMVEQSVIHAMIVLTMKLTETMFR
PLFLHSLEWAESEFEGSHLTKSRSLERTISFYMLVSKLIEQHRSLFVPYFKYLLEGCIQY
LAEDQDGGLPTSTQKRKKAKVGDTHNLGKDKVLSAKQWHLRALILKSLYHCFLYDTDQKF
LDSSNFQVLLKPIVSQLVVEPPASLEQMVDVPTVEEVDESLVLCLGQMAVTARSDVLWKP
LNHEVLMHTRNEKVRPRILGLKVVKYLVEHLKEEYLVFLPETIPFLGELLEDVELPVKTL
AQEILKEMETLSGESLRQYL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgatcgcgtcacagcttcaggcgatcaaatccgtcctgaagggagctcca
gatgcgatcagaaggcctcggactcgcccctccgtcatctttgatccgaaggaggccgcg
gatatcgatctcagaacgattcttccaatagccctatctgggttggaggttcttgttgat
cttgatggccgctttagaaagtatgaaggtactctttttagccagaccagtctcgagttg
gacagggagaagatggttcccaaagaagaagaaaagatcaacaagtcgatacattcatac
ctgcggttgctttccgggcacctgcaactccctgccgctctcaagaccctggagtacctt
gttcgaagataccaggttcatgtgttcaacatggatgagttggttctttgtgcattacct
taccacgacactcatgcctttgttcggatcgtccaactgctggacttaggaaataataaa
tgggcatttcttgagggcattaaaaactcgggtgctcctcctcctagacaagtcatcgtg
caacagtgcattcgtgataaagggcttttggagattttgtgcaactatgcatcgccgaca
aaagacttccagcattcaagaccagtagtttgcttttgtactgcagttattgtggaggcc
ctaggtgtgattcctgagcttgacacagatactgtgcagagggttctgggatttgtgttc
aatggacttaaccctactatgcggggaggtcgtgatgacaaggctggtgcattgatggtt
gttggtttactagcaactagagcaacattagcacctaaactcagccaaaatttggttttg
tttattgcacgaatggctcagcatgatgcaaatcaatcagtggacttaccatggcttcgt
gtgatgataatggctataattagccttgtgcagtcacagtctatgcaattgtttccaaag
aagactttgatgtttctgaaggatataagggatcttcctggtgtactttctggattgtct
agtgagttcaatattcaggggtttttgggcttgtatctgggatcactgattgaatacagt
acatcagatgactcctgctgcattacactgattaatatgctagaggctctagctttaaag
gattttgtaggaaagatcgtgtctaaggtgctctcatattgtatgaaattgtcacggggc
ttggagaattcaagtttatgtgaagcaggtatctgggcaaagaaaattttggttgtggtt
ggtaagcactacccatgtgaacttcgtggagctattcataaatttctggagagctccaaa
ataaatgcatgtgatgagcagtccattttggaaacattatcccagctgtttgatggaagt
ttagatatcccaatggagatatctgatcctaaattgtggttctctttagaacatccaaag
gtggcggttcgtcaagctacattatctaacatagctgcatctggtatgctgaaaagtatg
gcagctaatccacagaaggttataaatttaacaaatgcaataatacgtgggcttcatgat
gatgatctaagggttgttgaggcggctttgtctgtagatggactggttgggttagtcgag
gctccttgtcttctcaaagcttatcatcatgttctttccagatgcactgatatactttac
aatagtacatctaaaacatcacgagcttgtaatattgctgtatcatgccttgagcgtttg
gttgtggagtttcgatcacttcacatagattgttcaaaggaaattgctaccaccctattc
cctttacttcttgttgttccaaagacatggagggtgaatttgaaggctctggaattagtt
aagcaagtagaatggccattttatattgaaagctcaattgcatatgattcaactttcttt
gatcaaatgaagaatctggaatttgctcatgccacttccatcaacatgaaaactattgga
gctttggcggaaatgtttgcaacaaatcctgaagagcatatgcagtggttggttgaatgc
agcaactgtggtgcattgtcaaagagtttattctttctcatcatgttacaggcactaaag
gtgcaaaatgaagaatctgggagcttattgaagctatatcaagcttgcttttctgcactc
aagaatgagtggcatgagatggaacctcaaggtggtgttagttttgttgatgagctcaac
ttggacaaacttgataaaccttgcataggattcgtggaccagctgcttcatgctgatgtt
gacattttgaatctcaaaatcctaatttgcattttttggagcctcctgaaaagatacgtg
gaaataattaaacagaataccatggcggaaactgatgaatggctatctatactaaatgaa
ttgtttatcttctttgtaacatcaccatcgaagaacgtttttaaaaggcatcttcaattt
cttgtgactagttgcagcaaagctccttgttggtttctttcgaaatattttgcagaagaa
ggcgttcctgttgaaattcaagttgaaagccttcttttgttttctactctttgttctatg
agtgaattatctgaagacggcatggatgaaaacagtcatttgcagcatctacttggattt
ccttcacttctcattccactttcaaatgaaaacaaggatgtaagaacagctgccgtgaat
tgcgttgaaggactctacaaaatgtggcggctttttgatgtttctcggctaagaaatggg
aatgacaccatattgtctcgttgtgtatcatcaccgacttttggtgactttttagagtct
atagtgagccaaaagaagctgatttcctcggatgggaattttctttcttcatatttgaca
tcaatgctaagcttgtctgatcataactttttagttcctgacagcattcacaataggttt
gatcagcctacaaaggatgccatattgctttttattttgagttctacactgagattttcc
tcttacggaaagctagtggtattatcattgctcaaaggantgggaaatataatattacat
gtaggaggagtcaaatcattacttttcgaacttctggaaagacgcaataaataccacttt
gggcttgacaaagtgcagcaaaaactgtcaaagactgaaatagagaccttatgcttgctt
ttggaggtttgtgttccagtatcaagctctgcacatattgatgctgacatggtagattgt
ttaattaaagctttaagagtggatgctttgtctccagatgatgctgctgttgtacgacct
tgtgttactgttttgcaatctctgacacctgccatgtatggcagtttgaagactgagata
caggatcagctttttgggaaccttgtttttctattccggaatgataatggagacatacga
aatgcagctagagaagctctgctgagaataaatatcaactgctcaaccatagtcaggttt
ctagaattgattctttcgcaagatcatgagcttggctcctcaaaaagagtgaagagaaag
aaaaatctgattcatttcagttttggtatctctcaagatacgtttagtaaagaagaacca
acactgtccattcttgtctcttttcttgatattttgttgctcaagaagaatataaagaaa
agggaatccttggtgcaactacttttccaggctctagaaaaacttttttctaatgattgg
cttcttggtctgattggtcaaggtgaaaagggaagtggagccttatcagaagttcctgag
tcccttattagtgctgtctatcaagctcaacaaataacattattagttcttaaggatatt
actgattcacttatactggatcatccaataaaagatgacatgtttgataaggtcaacatg
aatcttctgattgaatgtgcccataccgctaaggatgttgcaagtcgcaatcatgtattc
ctgttgctgtcatctgtcgcaaaggtttcttctcgttgggtttcagaacacatcgttgat
atatttactgtaattggagaatctgctgtaaaacagaatgacagccattcccaacaagtt
ttggaggatatgatatcaacactggtaccacgttggttatcaaagaccaacagtgtagga
gagttgcttcagatattcataaaagctttgccagatgtcattgaacaccgaagactgact
ctaatggtttaccttctgaggacattaggagaagaaggtagcttgggcgtgcttgttgtg
tatcttttccactcgttggcttcacggatcacaaaatttccttctaaacatctgagggat
tggcatgatttgtcttcatcctcctttatcctcaatgagtgggaatatgaatttgcagca
caaatatttgatcagtattcttgtaaaatatggtttccttgcttggtaaaggttctgcaa
gaaattagagtacatagtgaacaagaagggctattacatgaactatatttggcaatgcaa
tttatcctatataagatgcacgatactgaattggtttttgagcttgagtctggacaagat
agggattgtctgcagattacacttggagaacttatggagcaggttgttttgcactcacaa
cttgtcaccgtgagacgcaaacaagtcagcgtcacttcagatatcataaaagcatttaaa
gattgtgccaatagagtgctaaaaactattacaaggtggatgttaccctctgcatacttt
aaaggaataactcagttactggggcatgcagatggaagtgtgaaaaggaagacgcttgga
ctactatctgaaactgttaagcaccatagtttggttcagaagaatcccaaggagatgaaa
aaaatgaagcagaagtttatggcatttccacttcatatagatgaaagctctgccccatcg
ttcaatgagttatgtttaaaaatagttgagttgattgataacaccacggatggttcagac
agtcccatgaagcttgctgcagtttcctcaattgaaataatggccaaagagttcccatct
gataatttaatatatgccacatgccttactgttatcgtgaagcacattggctctgataat
tcgaccctttcttctgggtgcattcgaaccacaggtgctttgatcagcgtgcttggctca
aaagcactgtctcagcttccccttcttatgaagcatatgatagccagagctcatgagatc
tccaattgccccattggaaatttcaaacataacctagttgatgtatctcaggaagttaca
agccacaaagtgtctctcttgctgtccatacttgtgactttggaagcagttgtagaaaag
cttggtggatttctgaatccatatcttgcagatatcttggatcttttagtacttcaccct
gaatatgcttcagaattagatatgaaaatgaaactgaaagctgctacggtccgaaagctt
ttgtcagagaaaattccagctcgccttatgctcacacctctgctgcaaatatactccagt
tctctcaaatgtggagaattgagcctatgtttggtttttgaaatgttatctagcatgatt
ggtgctatggataggtcatctatagtaacttatcatgcaaagctatttgaacagtgcttg
atggcacttgatcttcgccgccaacacccagagtcagtcaggaacataaatatggtagaa
caaagtgtcatccatgccatgatcgttctgacaatgaaacttaccgagaccatgttcagg
cctcttttccttcacagtcttgaatgggcagagtctgaatttgaaggaagccatcttaca
aaaagcagaagtttggagcgaaccatttccttctatatgttggtgagcaaacttatagag
caacataggtccctttttgtaccttacttcaagtacttgcttgaaggttgcatacaatat
ctagctgaagatcaagatggaggtttacctacttcaacacaaaagaggaaaaaagccaaa
gtcggggatacgcataatcttggaaaagataaagttttgtcagcaaagcaatggcatttg
agagcactgattctaaagtccttatatcactgcttcctctatgataccgaccagaagttt
ttagattcctctaactttcaggttcttctgaaacctattgtttcacagcttgtggtggaa
ccccctgcgtctcttgagcaaatggtggatgttcctactgtggaagaagttgatgaatca
ctggtattgtgcctgggtcagatggctgttacagcacgctctgatgttctatggaagcca
ctgaaccatgaggtgctaatgcatacaaggaatgagaaggtccgcccaaggattctaggt
ttgaaggtcgtcaagtacttggtagaacacttaaaagaggagtatctggtgttcttgcct
gagacgatcccatttcttggtgagctgcttgaggatgtggagcttcctgtgaaaactcta
gcccaagagatactcaaggagatggagacccttagcggtgaaagtcttcggcagtacctc
tga
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