KEGG   Elaeis guineensis (African oil palm): 105043789
Entry
105043789         CDS       T03921                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03420  Nucleotide excision repair
egu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105043789
   03460 Fanconi anemia pathway
    105043789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egu03032]
    105043789
   03400 DNA repair and recombination proteins [BR:egu03400]
    105043789
DNA replication proteins [BR:egu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    105043789
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105043789
SSDB
Motif
Pfam: ERCC4 CARD
Other DBs
NCBI-GeneID: 105043789
NCBI-ProteinID: XP_010919790
UniProt: A0A6I9R3F6
LinkDB
Position
4:13972277..13981360
AA seq 1004 aa
MLPFQEQIILDLLEDPNGGLVVLSSGLSLPSLVASLLLLHHPSQGSLLILSASDSQKSTI
IRSLRRLHHADSTRNPNPNSDPPLPSDIPGDLPSHHRTALYSSGAALFVTPRILIADLLT
SRVPPSAVAGLLILNAHRLSDTSTEAFIARILRSLSRSASVRAISDRPHAMVAGFAKAER
ILKCLFIRRLHLWPRFHVQVSADLECNPPKVIDVRVPMTPAMKGIQTAVLEAMDACLKEL
RRTNKVDVEDLTVEKGLFKSFDEIVRRQLDPIWHTIGKKTKQLVSDLKTLRKLLDYLVRY
DAVTYLKYLDTLRVSEGVRSVWIFADSSHRIFELAKKRVYQVVRADGLKINTDGKSEPSK
KRRANNDHKREKQNESGASLSNEADGGRIKSNVGVVLDEVLEEAPKWKVLRELLEEIEEE
RRKETQSREGQLMVEDGNDNNNFVLIACKDERSCLQLEDCIFKGPNQVMREEWEKYLLGK
AQLQGLRKRNRKRSQEPKGFGLLDGVVASGSSESAEPSSISKLENDALLAAASEISNLVK
EVIDVGNDSRPQTRRKGSGKGRGKRRPSKVVAKVQVSGKKSEKPAENKIVDNASLEKGEQ
QGETDTTSSGGFQEVALKSASDGKGVLQRHREESATAEFTDAKPLPPVQFYALDSDQHIL
EVWKPSVIIVYHPDMTFVREIEIYKADNRARNLKVYFLFYEDSTEVQKFEASIHRENGAF
ETLIRQKSLMMIPVDQDGRCIGPNASNEPQSTISQNSVTRKAGGVKPKEKEMQVIVDMRE
FMSSLPNVLHQKGMRIIPVTLEVGDYVLSPLICVERKSISDLFQSFASGRLYHQVETMVR
YYRIPVLLIEFSQDKSFSLQSASEIGDDVSPTSIISKLSLLVLHFPRLRLVWSRSVHATA
EIFASLKANQDEPDESKAIRVGVPSEDGIVEDDIRAENYNTSAVEFLRRLPGVTDSNYRA
LMDGCRNLAELALLPIERLAELMGSQKAARMLKDFLDAKCPTML
NT seq 3015 nt   +upstreamnt  +downstreamnt
atgctcccgttccaggagcaaataatcttggacctcctggaggatcccaatggcggcctc
gtagtcctctcctccggcctctccctcccctccctcgtcgcctccctcctcctcctccac
cacccctctcaaggctccctcctcatcctctccgcgtccgactcccagaaatccaccatc
atccgctccctccgccgcctccatcacgccgattccacccgcaaccctaaccctaattcc
gaccctcctctcccctccgacatccccggcgacctcccgtcccaccaccgcactgctctt
tactcctccggcgccgccctcttcgtcaccccgcgcatcctcattgccgacctcctcacc
tcccgcgtgcctccctccgctgtcgccggccttctcatcctcaacgcccaccgcctctcc
gacacctccaccgaggccttcatcgcccgtatcctccgctccctctcccgttccgcctcc
gtccgcgccatctccgaccgcccccacgccatggtcgccggcttcgccaaggcggagcgc
atcctcaagtgcctcttcatccgccgcctccacctctggccccgcttccacgtccaggtc
tcggccgacctcgagtgcaacccaccgaaggtcattgatgttagggttccgatgacccct
gccatgaaggggatccagacagccgtgctcgaggcgatggacgcttgcctcaaggagctg
aggaggaccaacaaggttgacgtcgaggacctcacggtcgagaaaggattgttcaagtca
ttcgatgagattgtgaggaggcagctcgaccccatctggcacaccattggcaagaagacc
aaacagctggtcagcgatctcaagaccctgaggaaattgttagattatctcgtcaggtat
gatgctgtgacttatttgaagtatttggatacactgagagtgtcggaaggagttaggtcg
gtttggatttttgctgactcaagccataggatatttgagcttgcaaagaagcgcgtttac
caggtggtccgagcagatggtttgaaaattaatacagatggtaagagtgaaccaagcaag
aagaggagagcaaataatgatcacaagagggagaaacaaaatgaaagtggagcttctctt
tctaacgaggccgatggtgggaggattaagtcaaatgtgggtgtggtgttagatgaagtt
ttagaagaagcgccaaaatggaaggtgttacgtgaattgctggaagagatagaagaagaa
cgcagaaaggaaactcagtcaagagaaggacaacttatggttgaagatggaaacgataat
aacaactttgtcttgatagcttgtaaagatgaacggtcatgcttgcagttggaagattgc
atctttaaaggcccaaatcaggtcatgcgagaagagtgggagaagtacttgctgggcaag
gctcagttgcagggcttacggaaacgcaacagaaaaaggtctcaggagcctaaaggcttt
ggtttacttgatggtgtggttgctagtggatctagtgagagtgcagaacctagcagcata
tccaagcttgagaatgatgctttgttagcagcagcatcagagattagcaatttggttaaa
gaagtgatagatgttgggaatgattctcgacctcaaacaagaagaaaggggtctggaaaa
ggaagagggaaaaggaggccgagtaaagttgtggcaaaggtgcaagtttctggaaagaaa
agtgaaaagccagcagaaaacaaaatagttgacaatgccagtttggaaaagggagaacaa
caaggtgaaactgatacaacatcatcagggggttttcaggaggtggctctaaaaagtgca
tctgatggcaaaggtgttcttcaaaggcatagagaagagtctgctactgcagagtttact
gatgctaagccacttccaccggtgcaattttatgcgctagacagtgaccagcatatactt
gaagtctggaagccttctgtaattattgtgtatcatccagatatgacctttgttagagaa
attgaaatttataaagctgacaatcgagcaagaaatttgaaagtttattttctgttttat
gaagattccactgaggtgcaaaagttcgaggcaagcatacacagggaaaatggtgcattt
gaaactttgattaggcagaagtccctgatgatgattcctgtggatcaggatggacgatgc
attggacctaatgcttctaatgagccacagtcaactatttctcagaactcagttactaga
aaggcaggtggtgtaaagccaaaggagaaagaaatgcaggttatagtggatatgagggag
ttcatgagcagccttcccaatgttctccaccagaaaggcatgcgaattatacctgttact
ttggaagttggggattatgtactttcacctttgatttgtgttgaaagaaaaagtatttca
gatttattccaaagctttgcatcaggccgtctctatcatcaggtggaaacaatggtccgt
tattataggatacctgtgcttctaatcgaattttcacaggacaagagcttctctttgcag
tctgcaagtgaaattggtgatgatgtttcaccaaccagcataatttcaaagctttcactt
cttgttctgcacttccctcgcttgcgccttgtctggtcacggagcgtgcatgcaacagca
gaaatatttgcatcactcaaagcaaaccaggatgaaccagatgaaagcaaggcaattaga
gtaggtgtgccatcagaagatggcatcgtggaagatgatataagagctgaaaattacaac
acatctgcagttgagtttttgcggcgtctaccaggggtgacagattcaaattatagagca
ctgatggatggatgcagaaacttggctgaacttgcccttcttcctattgagaggctagcg
gaactgatgggaagtcagaaagcagctcggatgctgaaggactttcttgatgctaagtgt
cccaccatgctgtaa

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