Elaeis guineensis (African oil palm): 105044056
Help
Entry
105044056 CDS
T03921
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105044056
03009 Ribosome biogenesis [BR:
egu03009
]
105044056
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105044056
Spliceosome [BR:
egu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105044056
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105044056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
105044056
NCBI-ProteinID:
XP_010920140
UniProt:
A0A6I9R446
LinkDB
All DBs
Position
4:8291939..8321838
Genome browser
AA seq
741 aa
AA seq
DB search
MDPDFHFDAVSSDEETVTVDEGAKKQSPWEFSSYSESVADEHVRRRTTSVDAKISKALQQ
RSVSLPDDEDDDDEEEPEEEVEEHEEEVLSADESTKKENHKFRKPDGKNTSGGADAFFAS
SDGASFHANSFIELNLSRSLLRACQALGYHKPTPIQAACIPLALTGRDICGSAITGSGKT
AAFTLPVLERLLFRPKRVRAIRVLILTPTRELAAQVHSMIEKLAQFTDVRCCLVVGGLPT
KMQEAALRSMPDIVVATPGRIIDHLRNSVSVGLEDLAVLILDEADRLLELGFSAEIHELI
RLCPKRRQTLLFSATMTEEVDQLVKLSLNKPVRLQADPFARRPATLTEEVVRIRRMREVN
QEAVLLALCSKTFTQKVIIFSGTKQAAHRLKIIFGLAGMKAAELHGNLTQAQRLDALELF
RRQEVDFLIATDVAARGLDIVGVQTVINFACPRDDKSYVHRVGRTARAGREGYAVTFVTD
DDRSLLKAIAKKAGSQLKSRIVAEKSIAEWSQLIEQMEDQILTVLQEEREERALRKAEME
ATKAENMIAHKEEIFSRPKKTWFATEKEKKLLAKAAKESLEKDKNGQNEVISAQQAEELK
LKEKRRREREKNLPRKKRRRLEAAREILENEEEDSNEDQETGGGKKGKTGKSLVDVAYRR
AKSMKAIQKAHEGGKVLKNSGKRAKQPSQKNQTRKEEMLELFQNDMSERKQSRTSERSNN
ASRRRKSKSSFKSKSRYKRRK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacttccactttgacgcggtgagctcggacgaggagaccgtcacggttgac
gaaggggcgaaaaagcagtcgccgtgggagttctcttcttactcggagtccgtggccgat
gagcacgtccggaggagaaccacctccgtcgacgccaagatctccaaggctctccaacaa
cgctccgtctcgcttcccgacgacgaagatgatgacgacgaggaagagcccgaggaggag
gtggaggagcacgaggaggaggtcctttccgctgatgaatccaccaagaaagaaaatcat
aaatttcgaaagcctgatggtaaaaatacgagtggaggggcagatgctttttttgcatca
tctgatggagcatcattccatgcaaattcttttattgagctgaacttatctcgctcttta
cttagagcttgtcaagcattgggataccataagccaacaccaattcaggctgcgtgcata
ccgttagcattaactggccgtgatatatgtggtagcgccattacaggctctggaaagaca
gctgcattcaccttacctgtgctggagcgtttgcttttccggcccaagcgtgtccgtgca
atcagggtgctcattcttactccaaccagagagctagctgcacaggtccatagtatgata
gagaaacttgctcaatttactgatgtcagatgctgccttgttgttggcgggcttccaacg
aagatgcaagaggcagccttgagatcaatgcctgatattgttgtagctactccagggaga
ataatagatcatctacggaattcagtttcagttgggcttgaagatcttgctgttctcatc
cttgatgaggcagaccgtctcctggagttgggtttcagtgctgaaattcatgaactgatt
cgcttgtgccctaaacggagacaaaccttgctattttctgctactatgactgaagaagtc
gatcagcttgtcaagctttcactaaataaacctgtacgccttcaggctgatccctttgcg
agacgaccagctacattgactgaggaggtagttagaatacgacgtatgcgtgaagtaaat
caggaagcagttctccttgcactatgttccaagaccttcacacagaaagtgatcattttc
agtggaactaaacaggctgcacataggttaaaaataatatttggtctggctggaatgaaa
gctgctgaacttcatggtaatctaactcaagcacaacgccttgatgctttggaactattt
agaaggcaagaagtcgattttctaattgcaactgatgttgctgctcgtgggctcgacatt
gttggtgttcaaactgtaattaattttgcatgccctcgtgatgataaaagctatgttcat
cgggttggccgtacagctagagctgggagagaaggatatgctgttacatttgtgactgat
gatgatcgttctctcttgaaggccattgcaaagaaggctggttcacaattaaagagtcga
attgttgccgaaaagtcaatagctgaatggtctcaattaattgaacaaatggaagatcaa
attttgacagttcttcaagaagaaagggaggaaagagcattgaggaaagcagaaatggaa
gcaacaaaggcagaaaatatgatcgcacataaggaagaaattttttcacgccctaaaaaa
acctggtttgcaactgaaaaggagaagaaacttctagctaaggctgcaaaggaatccttg
gaaaaagacaaaaatggtcaaaatgaggtaataagtgctcagcaagcagaagaattgaaa
ttgaaggagaaaagaaggagagagcgtgagaaaaatctgccacgtaagaaacgtcgaaga
ctggaagcagctcgggagattttagagaatgaagaggaagatagcaatgaagatcaggaa
actggaggtggcaagaaagggaaaacagggaaatcacttgttgatgtggcttaccgccga
gcaaaatcaatgaaagctattcagaaggcacatgaaggtgggaaggtattgaaaaattct
ggcaaaagggcaaaacaaccttctcaaaaaaatcaaaccagaaaagaagagatgcttgaa
ctattccagaatgatatgagtgaaaggaaacaaagccgtacctctgagagaagtaataat
gcttctagaagaagaaaatctaagagttctttcaagagtaaatcaaggtataagcggaga
aagtag
DBGET
integrated database retrieval system
