Elaeis guineensis (African oil palm): 105044092
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Entry
105044092 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K14311
nuclear pore complex protein Nup188
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105044092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105044092
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105044092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
105044092
NCBI-ProteinID:
XP_010920191
UniProt:
A0A6I9R486
LinkDB
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Position
4:7517339..7571875
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AA seq
1991 aa
AA seq
DB search
MASATAAINKAASPKPLEESLWWDSFVPLFEELDGAPLSDDLPDHLVKKIKNNRAWFLES
VTRFGPPDEASRFALDSPEITIGSHHLLIKPEHKEAALRVSKCLSLDEVQSYILVNRTSG
FNKSVADVEGHDFLHLILIQYYLERQCLLKCIRRIFVHALYIEKGSCLTEAVREEALQLV
YDGLEMKLLSTLKDLLSSVFSEKAEVDFMVLWVEETLIEVNLVLDILFLAYYDSFCSCKA
EQWKSLCLLFKDILCGSFNIRRLAVSVEARNSFFHAKAQLLLILIEMLDLENLLRMVHDE
VPFRQGYSAFTWSDIQEMDAGVSSFTDLGTMEAGPLILAWAVFLCLLLSLPDRHNSGMLM
EIDHIEYVRRAFEGAPFTYVLEILRSDTLRNSDGPVSGFFSVLRTFISAFIASYELSHQA
EDNTLNIILDILCQIYNGEESLSMQFWDRDSFVDGPIRSVLYMLEREYPFRIVEFVRLLS
ALCQGIWPAECVYNYLDKMSGITTLFEIPGGSGVVNLHDIIEIHHQFNVPGIEGLVIPSG
TCGQVLKVIDANVALVRWECAHSGVFLLLLRLAQEFHLYSYKEVFLTLNLLHRMISSNKA
LCFALMKIGKSPSVQASKWSVQIENDVRVELVKIICALVFCIVQDISNVGIVSLCFSILA
EMLKCAPSYVIEVASKSNVFSSELHCSSGGTWLLSGGLPRMLLVDGGESEECLPLTTSVL
DFTMALLEKGAADSMVSAFVVFSLQYVLVNHMHWNYKLKYDRWKVTLKVLEVMKSCVKAT
QVPNKLGHMIRDIIIYDSSVHNILCQVMCISRQALEQLYISHHYELKEIEDVQLAVCSAF
DIVHSILADLSEETFTNIPAFIQTMLSSTTKPMPVVTAAVSLISFCRNSAVQMAATKLLS
ILCFIASRFQSYSMENVNVFTDTTQIKELSSTICLILDEEVNRNEELIIAIFDLLISASC
YQPALLISVILPEEKEEVPSNAAGDMKNQLVGSPVIEPLSSNRTSPIDSILKYVERSEIL
ANSSPHLLLTVVSFLKALWEGGNQYIHVLDKIRSSEMFWKHLSSCMLATQTKNDLLEKNL
NNDEMDWSSFRYQCQGAXLDIISHELFFQEKILQDETYEKQTSNTFKGQTENRLSSEISK
SPTVLCPKDILSSWCESDIMNWLIKSYSFSGYDKEVIFHAKVAVCMFIVHLISKLSTTNA
GSLSISLIEKIHMISKKLSKHPAFAALLTQYSSRGYSKGKELTSLVISDLYYHLQGELEG
REITPGPFQELSGFLLDLETFQCSEQKQERNFGPLVKNVCMFDIPCIREELGMELWDHCN
WKASKEVAHIMFLHMREANLVMSVTDSKHFALKALITVISVYTGKISDKKSTLSDRGISG
KLIESSIEYVCECLQATVDSLIPDPSPRDNLLGFLATQVELLLVLSRILFGQHSQQTDRR
QCLPVSVHLIKTSGSAIKYLADVRPLTTMLKKAVKHLLMLLLTLVEFSYPKAYVKGKSDL
EVKLFAEASLASIGLLPVLCKYAENTEYSTLSVASMDLMLKGLLIPKIWLPILQKHLRLQ
LILQQVQQKESLDNIPVILNFFLTLGRTKGGAEMLYSVNFFSSLKELFDQLTNDMPLSNN
VDGGGFTNINHDGKHVHLWGLGLAVIISVIYSVGDDSSSTDIVDSAISYFFSEKAFVTFS
SLSAPSFAAHDHNKKRTRIQKAHTCLETLQLTELILMLICVLARYQVSWSKGMKDMDSEL
RETIIHLLAFISRGSHRIGESPIRTLTLFCPPTTKEDVELHEKPSFVKSKHGWFTLSPVG
FLVDNAVTSASNRGSSLLIKDQASKNADSIQQTYFSDIVAIQMYKLAFLLLKFLCMQAKT
AAKRAEELEFIDLAHFPELPMPEILHGLQDQAIAIVTEVCEANQSEPILPETESVCLLML
QILEKSLYLELCVSQSCGIRPVLGRIEDFSKGIKLLMRVAEQHTNFAAILRSLRQITALV
YPGLLQTNNVI
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgccacggccgcgataaacaaggcggcgagccccaagcccttggaggagtcc
ctctggtgggactccttcgtccccctcttcgaagagctcgacggtgcccctctctccgat
gaccttcccgaccacctggtaaagaagatcaagaacaaccgcgcctggttcttggaatcg
gttactcgcttcgggcccccggacgaggcatcacggtttgctttggattctcctgagata
actatcggatctcatcacctattaataaagcctgagcacaaagaggccgccttacgagtt
agcaagtgcctgtccttagatgaggtgcagtcatacattcttgtgaataggacttctggg
tttaacaagtcagttgctgacgttgaaggtcatgattttcttcatttgatattgattcaa
tattaccttgagaggcagtgcttgttgaaatgtatcagacgaatcttcgtgcatgctttg
tacatagagaaggggtcttgtttgactgaagctgttagagaagaggctttgcaattagtt
tatgatgggttggaaatgaagctcttatccaccttgaaagatctcctttcttctgtattt
tctgagaaagctgaagttgacttcatggttctgtgggtggaagaaactttgatcgaagtt
aacttggtcttggacattttattccttgcttactatgacagcttttgtagctgcaaagct
gagcaatggaaaagcttatgcttgcttttcaaggatatattatgtggttcatttaacatc
agaaggctagcagtatcagttgaagcaagaaattcattttttcatgcaaaggctcagcta
ctccttattcttattgaaatgctggacttagaaaatctccttcggatggttcatgatgaa
gtgcctttcaggcagggttattctgcctttacatggtctgatattcaagagatggatgct
ggagtttcaagctttactgatttgggaacaatggaagctgggcctttgattcttgcatgg
gcggtgtttctctgtctactattgtcacttccagatagacataatagtggtatgctcatg
gagattgatcatattgagtatgtccgtcgagcctttgaaggtgctccattcacttatgta
ctggagattcttcgcagtgatactttaaggaactcggatggccctgtttctggtttcttt
agtgtcttgagaacgttcatttcagcatttattgcctcctatgagctgtcacatcaggca
gaggacaacactctgaacataatcttggatatcctttgccaaatttacaatggagaggaa
tcactatccatgcaattctgggacagggatagttttgttgatggtccaattcgttctgtc
ctttatatgctggagagagaatatccatttcgtattgttgaatttgttcgcttgttgtca
gcactttgccaaggaatttggcctgcagaatgtgtatacaattaccttgacaagatgagt
ggtataacaactctgtttgaaatccctggtggttctggtgttgtgaatcttcatgacatc
atagagattcatcatcaattcaacgtccctggtattgaaggtcttgtaattcctagtgga
acctgtggacaagttttgaaagttattgatgcaaatgttgcactggtccgttgggagtgt
gcacactcaggagtttttcttttactcttacgcttggctcaagagttccatttatatagt
tacaaggaagtctttcttactcttaacttgcttcatcggatgatatcatctaacaaggca
ttgtgctttgctttgatgaaaattggcaaatctccatctgttcaagcttctaagtggagt
gtgcaaatcgaaaatgatgtgagggttgagttggtcaagattatctgtgctttggtcttc
tgtatagtccaggatattagcaatgtgggtatagtgtctctttgtttcagtatattggca
gaaatgttaaagtgtgctccttcttatgttattgaggtggcatcgaagtcaaatgtcttc
tcatcagaattacattgttcatcaggtggcacgtggttgctttcaggagggcttcctagg
atgctcttggtggatggtggggaaagtgaggagtgtttgccactgacaacttcagtcctt
gatttcactatggcacttttggaaaaaggggcagctgatagtatggtttctgcttttgtt
gtattttctcttcaatatgtactggttaatcatatgcattggaattacaagttgaagtat
gatcgctggaaagtgacattgaaggtgttagaagtgatgaaaagctgtgtaaaagcaacc
caggttccgaataaacttggacacatgattcgggacattataatatatgactcttcggtt
cacaacattctttgtcaggttatgtgtatttcaaggcaagcattggagcaattgtatatc
agtcaccattatgagctaaaggagattgaagatgtacagcttgctgtgtgctctgcattt
gatatagtgcactccattctggcggatctatcagaggaaacatttaccaacataccagcc
ttcatccagacaatgctttcatctacaactaaaccaatgccagttgttacagcagcagtt
tcgttgatttccttttgtcgtaattctgcagtgcaaatggctgctacaaaactgctttcc
attttatgcttcatagcatcaagattccagtcatattcgatggagaatgtcaatgttttt
actgacactacacagatcaaagaattaagcagtaccatctgtcttattctagatgaggaa
gtgaacagaaatgaagagctgatcatcgctatttttgaccttctaatttccgcttcttgt
tatcagcctgctctccttatttctgtgatattgcctgaggagaaagaggaggtaccatca
aatgctgctggtgatatgaaaaatcagctagttggctcccctgttattgagccattaagc
tctaacagaactagtcccattgactcgattttgaaatatgttgaaagatctgagattctt
gcaaacagctctcctcatttactgctcaccgttgtaagcttcttgaaggcattgtgggaa
ggaggaaaccaatatatacatgtcttagataagattagaagctcagaaatgttctggaaa
cacttgtcatcatgtatgttagctactcaaaccaaaaatgatcttctagagaaaaatttg
aataatgatgagatggattggtcgtcattcaggtaccagtgccagggtgctnatttagac
atcatttcgcatgaattattctttcaggaaaaaatattacaagatgaaacgtatgaaaaa
cagacttctaatactttcaaggggcagactgaaaataggttaagctctgagatatcaaaa
tctccaactgtactctgcccgaaggatattttgtcaagctggtgtgaaagtgatatcatg
aactggcttatcaaatcttattcatttagcggatatgacaaggaggttatctttcatgct
aaggtggctgtctgtatgttcatcgttcatttaataagcaagctatcaactactaatgct
gggagcctgtcaatatcattaattgagaaaattcatatgatatccaagaagttgagcaaa
catccggcatttgctgctcttttaacacaatactcatcacgcggctatagcaagggaaag
gaactcaccagtcttgtaattagtgatctttattaccatctacaaggagaacttgaaggt
cgggagattactcctggtccatttcaggagctgtcaggtttcctacttgatttagaaact
ttccagtgtagtgaacagaagcaggagaggaactttgggcctcttgtcaagaatgtttgt
atgtttgacattccatgtatacgagaggaactaggaatggaactatgggatcattgtaat
tggaaggcatctaaggaagtagctcatataatgttcttgcatatgcgtgaagcaaatttg
gttatgtccgttacagattcgaagcattttgcactaaaagctttaataactgtcatatct
gtgtacactggcaaaatatcagacaaaaaatcaacactttctgacagggggatttctggg
aaacttattgaatcaagcattgaatatgtatgtgaatgcttgcaggcaacagtggattca
ttaattccagatccaagtccacgtgacaatttactagggtttcttgcaactcaagtggaa
ttgttgcttgttctctccaggatattgtttggacaacattcccagcaaactgacagaaga
cagtgccttccggtttctgtgcatctcataaaaacttcaggatcagccataaaatatttg
gctgatgtcaggccattaaccacaatgcttaagaaagcagtgaagcatctccttatgttg
cttcttacattagtggagttcagttaccccaaagcatatgtaaaaggaaaatctgatttg
gaagttaagctttttgctgaggcatctcttgcaagtattggattgttacctgttctctgc
aaatatgcagagaacactgaatattctactctttctgtggcatcaatggatttaatgctg
aagggcttgttgattcctaagatttggttgcctatcctacaaaagcatctgcggctgcag
cttattctccagcaagttcaacagaaagaatctctagataatattcctgtaattttgaat
ttctttttgaccttggggcgcacaaaaggcggtgctgagatgctttattctgtgaatttt
ttctcttcactaaaggaactattcgatcaactaactaatgatatgcctttatcaaataat
gtggatggaggtggttttaccaatatcaaccatgatggaaagcatgtgcacctctgggga
cttggtctggctgtcatcatatcagtaatttattctgtaggcgatgattcttcttctact
gatattgtggactccgctataagctacttcttttctgaaaaagcatttgttactttttct
tctctttctgcaccaagcttcgctgctcatgatcacaacaagaagagaacaagaattcag
aaggcacatacatgtcttgagactctccagctgactgagctcatcctcatgcttatttgt
gttcttgcaagatatcaggtctcatggagtaagggcatgaaagatatggattcagaacta
agagagactatcattcatcttttggccttcataagcaggggaagtcatcgcattggagaa
tcgccgatcaggaccttgactcttttctgcccaccaactaccaaagaggacgttgagctt
catgaaaagccatcatttgttaagagcaaacatggatggttcactctctctcctgttggc
tttctggtggataatgcagtcacctctgcctcaaacagaggatcatcactgctgatcaag
gatcaagctagcaaaaatgctgattcaattcagcagacctatttttcagacatagttgct
atccagatgtataaacttgcttttctccttctgaagttcttatgcatgcaagctaaaact
gcagctaaaagggcagaggagctggagttcattgatcttgcacattttcctgagcttcct
atgcctgagattttgcatggcttacaggatcaagcaattgctatcgttacagaggtctgt
gaagcgaaccagtcagaacccattctgccagaaacagagagtgtgtgcctcttgatgtta
caaatactggagaagtcattatatttggaattatgtgtatcccagtcttgtgggatccgg
ccggtattgggacgcattgaagatttctccaagggaattaaattattgatgcgtgtggct
gagcagcatacaaactttgcagcaatattaaggtcattgaggcagataacagctctagtg
tacccagggctattgcaaactaacaacgttatatga
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