Elaeis guineensis (African oil palm): 105044150
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Entry
105044150 CDS
T03921
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X2
KO
K14962
COMPASS component SWD2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105044150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105044150
03036 Chromosome and associated proteins [BR:
egu03036
]
105044150
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105044150
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
105044150
COMPASS/SET1 complex (yeast)
105044150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
PQQ_2
KNTC1_N
eIF2A
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
105044150
NCBI-ProteinID:
XP_010920256
UniProt:
A0A6I9R4C6
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Position
4:complement(6304092..6311037)
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AA seq
330 aa
AA seq
DB search
MPGGALEREERVSMELTDEVLKSMEVGMAFRDYNGRISSMDFHRTNHLVTASDDESIRLY
DVQNAVCLKTINSKKYGVDLVCFADNPATVIYSSKNGWDESLRLLSLNDNKYLRYFKGHH
DRVVSLSLCPHREYFVSGSLDRTVLLWDQRTEKAQGLLRVQGRPAVSYDDQGMVFAIAFG
GYIRMFDARKYEKGPFDIFPVGGDNLEANVVKFSNDGRLMLLTTTDGHVHVLDSFRGTVI
STYNVKPVSSNATLEASFSPDGMYVVSGSGDGSVYAWSVRSGKVACWASTDTEPPLIQWA
PGSLMFATGSSELSFWIPDLSKLGSFAGMK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcggggcgctggagagggaggagagggtctccatggagctgacggacgaggtg
cttaagagcatggaagtcggcatggccttccgagattacaatggcagaatcagttccatg
gattttcacaggaccaatcatctggtaacagccagtgatgatgaatcaattcgcctttat
gatgttcaaaatgccgtgtgtttaaagacgatcaatagcaagaagtatggtgttgatttg
gtttgcttcgctgataatccagcaacagttatctactcttcaaaaaatggttgggatgaa
tctctgcggctgctttctctgaatgataacaagtacttgcggtacttcaaaggccaccat
gacagggttgtttctctgtcgctctgtccccacagggaatacttcgtctctgggtctctt
gatcggactgttttactatgggatcaaaggactgagaaggctcagggcctcttacgtgtg
caaggaagacctgcagtttcttatgatgaccaaggaatggtttttgcaattgcatttgga
ggctacatacgaatgtttgatgctcggaaatatgagaaggggccgtttgatatctttcct
gttggaggagacaatttagaagccaatgtagtaaagttcagcaatgatggcaggcttatg
ctattgactactactgacgggcatgttcatgttcttgattcttttcggggcactgttata
tccacatacaatgtgaaaccagtttccagcaatgcaacattagaggcatctttcagtcct
gatggaatgtatgttgtatcaggttctggtgatgggagcgtttatgcctggagtgtcaga
agcggcaaagttgcatgctgggcaagcactgatactgaaccacctctgatacagtgggct
ccaggaagtctcatgttcgctactggatcatctgaattgtcattttggatcccagattta
tcgaagttgggatcctttgctggcatgaaatag
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integrated database retrieval system
