Elaeis guineensis (African oil palm): 105044204
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Entry
105044204 CDS
T03921
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105044204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105044204
04121 Ubiquitin system [BR:
egu04121
]
105044204
03036 Chromosome and associated proteins [BR:
egu03036
]
105044204
03400 DNA repair and recombination proteins [BR:
egu03400
]
105044204
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105044204
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105044204
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105044204
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105044204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_6
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
PTCB-BRCT
PHD_NSD
zf-RING_2
zf-RING_10
RTT107_BRCT_5
zf-C3HC4_4
zf-RING_5
zf-C3HC4
PIG-L
Motif
Other DBs
NCBI-GeneID:
105044204
NCBI-ProteinID:
XP_010920325
UniProt:
A0A6I9R4J5
LinkDB
All DBs
Position
4:4749264..4757745
Genome browser
AA seq
756 aa
AA seq
DB search
MLPPNESGLPALKVIPTVHSRWAPAQLFVREETLNDPHRPRLRKHAHRPRFRVFDAMSTT
SFPLKTQNLTPRARERERERMAELEGFRRLLNPLVLNLQKMELELTCPICLKLLNMPRLL
PCNHISCSSCVTISTMHGHDCPICKVPFHHQDLRPSIHVEIMVNIYKSMNSAVGAILTQR
GEQVAISDTKMPSGGSPDFGDRNDEEKSEEEPIHNRDGEGSKYMQSHAPIFGNFRTGNPR
CVGEKNEPAMNISKKDVQSNGVEAFLQEKKLYSPQSSGDQKESDYDSNDMGNEPRNGNDS
CKRGSKVGTSQTGEDYIRDSKRQKLGNAVDVGDITGDVHAKEFSIFNSESVHEHQRCPNI
KSLHTTVHEDMNELFICAFCHSTRTTEASGPMLHYIDGKPVPDDQALQLNVLHVHQKCIE
WAPQVFFVGETAVNLDAELARASKIKCSSCGLKGAALGCYVKSCRRSFHVPCAADIQDCR
WDAENFLLLCPVHFSHKLPCERSKARKKTKANRSLCYSSSPGDLTSPTKQQSDKLWTASP
SVTQEWLLCGSSLSNMEKDALNDFVSLTGASVTNTWKANVTHVIAATDEHGACSRTLKVL
MAILRGKWVLNVEWLRACIKAGHPVPEEPHEISHDIHGAFDGPRNGRIRAMQKAPKLFTG
LTFYFSGHFMPYYKDHLEDLIVAAAGTVLEKSEITPTTFIVYSTEPPQGSNSDGQHEVIK
KRKEEAEDLAARIGSRAIPHTWLLDSIASCNIQLNL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgttacctccaaatgaaagtggacttcccgcgctcaaagtgattccaacggttcactca
cgctgggcgcccgcgcagcttttcgtccgggaggagacgttgaatgatccccaccgtccg
cgtctccgaaaacatgcccatcgcccgcgctttcgagttttcgatgccatgagtacgaca
tcctttcctttaaaaacccaaaacctcactccgcgagcgagagagcgagagagagagaga
atggcggagctagaggggttcaggagattgctcaaccctttggtacttaatctgcagaag
atggagttggagctcacgtgtcctatctgtttaaagttgcttaacatgccaaggttgttg
ccatgtaatcacatatcttgcagttcttgtgtcactatttcaactatgcatggacatgac
tgtcctatttgtaaagtaccttttcatcatcaagatttgaggccttctattcatgttgaa
ataatggtgaacatatataaaagcatgaattcagctgttggtgctatcctcacacaacga
ggggaacaagttgctatctctgacacaaagatgccttcaggtggaagtccagattttggt
gacagaaatgatgaggagaaatctgaagaggaaccaatacataacagggacggagagggt
tcaaaatatatgcaatcacatgcaccaatttttgggaactttagaactgggaatccaaga
tgtgtaggggagaaaaatgagcctgcaatgaatataagcaagaaagatgtacaaagcaat
ggagtggaagcatttcttcaagaaaagaaactatacagtccacaatcttctggtgaccag
aaagagtcagattatgacagcaatgacatgggaaatgaacctagaaatggtaatgattca
tgcaagagaggttcaaaagttggaactagtcaaacaggagaagactatattagagactca
aaaaggcagaaattgggtaatgcagttgatgttggagatattactggtgatgtccatgct
aaggaattttcaatatttaattctgaatctgtacatgaacatcaaagatgcccaaatatt
aagtcattgcatacaactgttcatgaagacatgaatgagctttttatttgtgcattttgc
cattctactagaaccactgaggcttctggaccaatgttacattatattgatggaaaacca
gtgccggatgatcaagcattgcagctcaatgtcttacacgtccatcagaaatgcattgaa
tgggcaccacaggtattctttgttggtgagactgctgtgaatttagatgctgaacttgca
cgtgcatcaaaaatcaaatgtagcagctgtggactcaagggagcagctcttggttgctat
gtcaagagctgccgaagaagctttcatgtcccatgtgctgctgatatccaagattgtaga
tgggatgctgaaaattttcttttgctgtgtcctgttcatttttcacacaagctgccatgt
gagagatcaaaggctcgaaagaagaccaaggctaatcgttccttgtgctattccagttca
ccaggtgatttaacttcacctacaaagcaacagagtgataaactttggacagcttcaccc
agtgtgactcaggaatggttgctatgtggatcttcactttctaacatggagaaggatgct
ctaaatgactttgtgagcctaaccggtgcctctgtaaccaatacgtggaaggcaaatgta
acacatgtgattgctgccactgatgagcatggtgcttgcagcagaacactgaaggtgctc
atggctatattgcgtggaaaatgggttctaaatgtagaatggctaagagcatgcataaag
gctgggcacccggttccagaggagcctcatgaaatcagccatgacattcatggggcgttt
gatggacccagaaatggaagaataagagccatgcaaaaggcaccaaaactgtttacagga
ttaaccttttattttagtggtcattttatgccttactacaaggaccatcttgaagatttg
attgttgctgctgctggaactgtattggagaagagtgaaatcactcctacaacttttatt
gtttatagtacagaacctccacaaggaagcaattcagatggtcagcatgaggttataaag
aagagaaaagaggaggctgaagatttagcagctagaattggctctcgggccattcctcac
acatggcttctggattctattgcttcctgcaatatacaactaaacttgtag
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