Elaeis guineensis (African oil palm): 105044771
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Entry
105044771 CDS
T03921
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egu03009
]
105044771
04121 Ubiquitin system [BR:
egu04121
]
105044771
Enzymes [BR:
egu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105044771
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105044771
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105044771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
zf-RING_2
zf-rbx1
HEAT_GCN1
zf-ANAPC11
zf-C3HC4
FANCL_C
HEAT_MROH2B_C
zf-C3HC4_2
ParcG
RINGv
IBR_1
Motif
Other DBs
NCBI-GeneID:
105044771
NCBI-ProteinID:
XP_010921079
UniProt:
A0A6I9R5P9
LinkDB
All DBs
Position
5:complement(7895289..7924072)
Genome browser
AA seq
1942 aa
AA seq
DB search
MGKQKGEGGRSKNRPSSSSLAASLLPAGVSSVGFGGYLGRSRIESSSPAEESTPFWDVDS
EVAQHLKRLGRKDPTTKLKALTALSMLFKQKSAEEIVQIVPQWAFEYKRLLHDYNREVRR
ATHDTMANLVTAIRRGLAPHLKSLMGPWWFSQFDPNPEVSQAARRSLEAAFPAAERRLDA
LMLCVNEIFLYLDENLKLTPQAMSDKATPIDELEDMHHRVISSSLLAVATLVDILLGVKL
ESHDDENVNPEQKLVSKARRATIFSAENMFSVHKYFLEFLKSKNPAIRSSSYSVLTSFIK
HIPHAFNEGNMKMLSPAILGAFQEKDASCHSSMWDMILLFSRKFSGGWSHCNVQKVVLNR
LWHFLRNGCYGSQKISYPAMILFLESIPPEAVVWEQFIFDFFHNLWAGRNQLHSSAADTL
ALFNAVKECFLWELYDASRYSAAGDRLNHLPVKLVNEILVGLLWHDYLSLVSLKTRDEKL
EKCDGLAEDGSRLSHERSQHMLNACYPTTYVQELGKCIIGILSDMSLKESDLLNLFCTSF
QKDCLEVIQEGDRLLKFHENLDRIVNFFRLLDQHALQKGQTWPLHCLARPLVTKSFPVMK
SMDSPDVVSLLSVLVEIFGPVTIFSYGGQTTDERDVESKMKDFLQMFNDDFIPWCFHGYS
HSSNSKLDLLIALVQDECFCEQWCSILTYATKLEDFSVSESSDNFNHIELLAILIEKVRQ
RISSKKLGHLQKNGSLPENWRHNLLDSVATFVACHSVSEVGHAKFLRAVLGGAIEDDQIC
FLSKEAQTIIFKGILKNLSLILSTSPFHWAKFSCSLLLSDGSMDFSHIQEPSSIIQFERA
RFAFEVLEGSIFCLKLLDEDCTLISSILAALFIIDWECSMTSHLGDDSSESCKHDADAKT
SVSASRDVVNNNSEEQASAKLALGSSMHAFRRKISTSFWRSLSSSITSRLGNILVQTIKC
AVFETTDLSVNSVSALCSEWFLSMLEVICHGHTELQMLLDQMLSESRSWPLWVAPLFHDG
TRTADMQVKTVDMSTNDLRHHQFIAFVDKIISSLGVGKVIAGVPEMHISTASPTSELVSC
FSSCSRAWLAAELLCTWNWKAGCASDSFLPSLSKYAESETSSSVINVVSSVVNILLDGAL
VHGAFSQWISFNAWTVSDDDIENIQDPFLRALISLLSTLFIKDKIWGKSEADVFFEHVLG
KLFITTTVNRPCLRILPFVLGVIIRPLLESSEFNEAKKDVSLVTARDDLVSKNILSWLET
ALSFPSLGSGQTGQQDLEEWIQVVISCYPLSVVGSIGKFKVELLRDIGYPERHLLLSLFR
RQRCCYDACTTSNQMSSAASSNEGSFTLMLVQMIQAKLTAVSVGYCWQEFDEDDWNFVLD
KSHKWIESSVCLMEEIAENIDDAVINCPATEDLELIKRKLEIAVQALDPLQMHISHTAVI
ILCLLFQLDELHVADNVEVLQSIRLGKWAYIKDRTVASILRLFFAAGVAEAIASSCGGEA
SSIVASSRLAYSQFWGLVASFVINSPDHVKNAAVQSMELWALSKGSVSSLYAILFSSRPI
YSLQFAAYSLLSSEPISHLSLVKEGCLDGNAIANQESDLSHSVESSVEESFCLRDEIACV
IQKPAAELFEMDLVAQDRVNVFLAWALLLSYLHSLPSSSTARERLIQYIQDSVSSTIIDC
IFQHVPMKLGASNVKKKDVELAVETSKAANAAKHAISTCSLFVYVESLWPVGTERMASLS
GAIYGMIIRLLPSYVRNWFTSLRDRSFSSAVEYFTKAWCSPPLLLDELSQVKETVTADEN
FSVSVNRTAYEIIATYKKEETGMDLVICLPSCYPLRPVDVECTRSLGISEVKQRKWLLSL
TAFVRNQNGAIAEAIRIWKSNFDKEFEGVEECPICYSIIHTTNHSLPRLACKTCKHKFHS
ACLYKWFSTSHKSTCPLCQTPF
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacaaaagggagaaggtgggaggagcaagaaccggccttctagcagcagctta
gctgcttcgctgttgcctgccggcgtttcaagcgttggattcggaggttatcttggaaga
tctcggatcgagtcatcttcaccggctgaggaatcgacgcctttttgggatgtggatagt
gaagttgcacaacacttaaagaggctgggtagaaaggatcctacaacaaagcttaaagct
ttaacagcattatctatgctctttaagcagaagtctgctgaggaaatagtacaaattgtt
ccacaatgggcatttgagtacaagagactcttgcatgactacaatagagaggtccgtcga
gctactcatgataccatggctaatcttgtcactgccatcaggagaggcttggctccgcat
ctcaagtctttgatgggtccttggtggttttctcagtttgatccaaatcccgaggtttcc
caagctgctaggcgatccttagaggcagcatttccagcagcagaaagaagattggatgcc
ttgatgctatgtgtaaatgagatcttcctatacctagatgaaaatttgaagcttacaccg
caagcaatgtctgataaggcaacaccgatagatgagttggaagatatgcaccatcgtgta
atttcatcatcactgttagcagtggcaactcttgttgatattttgctgggagtaaaatta
gagagccatgatgatgaaaatgttaaccccgaacaaaaacttgtttccaaagctaggagg
gccacaattttttcagctgaaaatatgttttctgtgcataaatattttcttgaattcctc
aagtccaaaaatcctgctattcgttcatcttcatattcggttctgacaagtttcataaaa
cacatacctcatgcttttaatgaaggaaatatgaagatgctttctcctgccatacttggc
gctttccaagaaaaggatgcatcgtgccattcatccatgtgggatatgatattgcttttc
tctagaaaattttctggcggctggtcccactgtaatgtccaaaaagttgtcctaaataga
ctttggcactttttacgaaatgggtgctatgggtcacaaaagatttcctacccagccatg
atcttattcttggaatctattcctcctgaagcagtggtttgggagcaatttatcttcgac
ttcttccataacctgtgggctggaagaaaccagttgcactcgtcagctgcggatactttg
gctttattcaatgcagtcaaagaatgttttctttgggagttatatgatgcttcaagatat
tctgcagcaggagaccgattgaatcatcttccagtcaaacttgtaaatgagattcttgta
ggattactatggcatgattatctttcattggtcagcttaaaaactcgagatgaaaaactc
gagaaatgtgatggcctagctgaagatggcagtcgattatcccatgaaagatcacagcat
atgctcaatgcttgttatcctacaacgtatgtccaagaactggggaaatgcattatagga
attctgtctgacatgtcattgaaagaaagtgatttgctcaatcttttctgtacatcattt
caaaaggattgtttggaggtaattcaggaaggggaccgcttactgaaatttcacgagaac
ttggatcggattgtgaatttttttaggctactggatcaacatgcattgcagaagggtcaa
acatggcccttgcattgtttagccagaccattggtaactaagtctttccccgtgatgaaa
tctatggactccccagatgttgtcagtcttttgtctgtattagttgaaatatttggacct
gtaacaatattctcatacggtggtcaaacaactgatgaacgtgatgttgagtcaaaaatg
aaggattttctacaaatgttcaatgatgattttattccttggtgttttcatggttatagt
cattccagcaattcaaaacttgatttattgattgctttagttcaagatgaatgtttctgc
gaacaatggtgttcgatccttacctatgctacaaaacttgaagatttttctgtatctgag
tcctcagacaatttcaatcatatcgaattgttggcaattctcattgagaaggtgagacaa
agaatcagtagcaagaagctgggacatttgcagaaaaatggctctctcccagaaaactgg
cggcacaacctgttagattcagtagcaacttttgttgcctgtcattctgtttcagaagtt
ggccatgcaaaatttctacgtgctgtacttggaggtgcaattgaagatgatcagatctgc
tttctttctaaagaagcacaaacgataatattcaagggaattttgaaaaatctgtcattg
atccttagtacatcgccttttcactgggcaaagttttcatgctctttgttgctgtctgat
ggatccatggacttctcacatatacaggaaccatcttccattatccagtttgagagagct
cgatttgcttttgaagttctcgagggtagcatattttgcttgaagctacttgatgaggat
tgcactttgatttcttccattttggcagctttattcatcattgactgggaatgtagtatg
acatcacatttaggtgatgatagttcagaaagttgtaaacatgatgccgatgccaagaca
tctgtatcagcatccagagatgtggtaaataataactcagaagagcaggctagtgctaag
ttggctcttggaagcagtatgcatgcttttcgccgtaagataagtacctctttctggaga
agcctcagctcaagcatcacatcaaggttgggaaacattttagttcagaccataaaatgt
gctgtatttgaaacaactgatttaagtgtaaattcagtgtctgctttgtgctctgaatgg
tttttgagtatgttggaagtcatctgtcatggtcatacagagttgcaaatgttgttggac
cagatgttatctgagagcagatcctggcccttgtgggttgctcctcttttccacgatgga
actaggacggccgacatgcaagtcaagacagttgatatgagcactaatgacctgaggcat
catcaatttattgcttttgttgacaagattatttcaagtcttggagtgggcaaagtgatt
gctggtgttccggaaatgcatatttctacagcatcacctaccagtgaacttgtttcatgc
ttttcttcttgctcgcgagcatggcttgcagctgagctactttgcacatggaactggaaa
gcaggctgtgcttcagactcattcttaccttctctgagcaaatatgcagaaagtgaaaca
tcctcttctgtgataaatgtagtgtcttctgtagtcaacatattgcttgatggtgctctt
gtgcacggagcttttagccaatggatctcatttaatgcatggactgtttcagatgatgac
attgagaatattcaggatcccttcctgcgtgccctaatttccttgctatcaacactattc
atcaaagacaaaatttggggaaagagtgaagctgatgtgttctttgaacatgtattaggc
aaactttttattactacaactgtaaatagaccctgtctaagaattcttccttttgttctt
ggtgttattattcggccattactagagagctctgagtttaatgaagctaaaaaagatgtt
tcactggttactgcaagggatgatttagtgagtaagaatatcttgagttggcttgagaca
gctctatcattcccttctttgggctcggggcaaacaggacagcaagatctggaagaatgg
attcaagttgtcatatcttgttatcctttaagtgtagtaggaagtattggaaaattcaaa
gttgagctgctgagggatattggctatccggagagacacttattgttgagtttgttccga
aggcagcgatgctgctatgatgcttgtacaacttctaatcagatgtcttctgctgcatca
tccaatgaaggttcatttactttgatgttagtacagatgattcaagcaaagctaacagca
gtttcagttgggtattgttggcaggagtttgatgaagatgactggaactttgtgttagat
aaatcacataaatggattgaatcatctgtttgtctaatggaggaaatagcagagaatata
gatgatgctgtaataaactgtccagcaacagaggacttggaactaataaaaaggaagctt
gaaatagcagttcaggctttagatccattacaaatgcatatttcccatactgctgtgatt
atattatgtctgctcttccagcttgatgaactccatgtagcagataatgttgaagttttg
cagtcaataagattggggaagtgggcctatattaaagatcggacagtggcaagtattctt
cggcttttttttgcagctggtgttgctgaagccattgctagttcatgcggtggagaggct
tcatcaattgtagcctcaagtcggcttgcttattcacaattttgggggctagttgcatca
ttcgttatcaattcacctgatcatgttaaaaatgcagcagtgcagtccatggaactatgg
gctcttagcaagggctcagttagctcgttgtatgcaattcttttttcctccagaccaatc
tattctttacaatttgctgcttatagtttactttcttcagaacctataagtcatctgtcg
cttgttaaagagggttgcctggatggaaatgcaattgcaaaccaagagtctgacttgtcg
catagtgttgaatcatctgtggaagagtctttctgtctgagggatgagatcgcatgcgtg
atccagaaaccagctgctgaactttttgaaatggatttagtagcacaagacagggtaaat
gtctttcttgcctgggctctattgttgtcttatctacattcgctgccatcttcttccaca
gcaagggaaagattgattcagtatatacaagactctgttagttcaacaataatagattgc
attttccaacatgttcctatgaagttgggtgcaagtaacgtaaagaaaaaggatgttgag
cttgcagttgaaacatctaaggctgcaaatgccgctaagcatgccataagtacgtgctct
ttatttgtatatgtagagtcactttggcctgttgggaccgagcggatggcttcactttct
ggtgcaatatatggaatgattattcgacttctaccttcttatgtgcgcaattggtttact
agcttgcgtgaccgttctttttcatctgccgttgagtatttcacaaaagcatggtgtagt
cctccacttcttttagacgagttatctcaggtaaaagagactgttactgctgatgagaac
ttctcagtgagtgtgaatagaacagcatatgaaattattgctacctataaaaaggaggag
acaggaatggatcttgtaatttgccttcccagttgttacccattgcgtcctgtggatgtt
gagtgcacaagaagtctgggcatcagtgaagtgaagcaacgaaaatggttgctatcccta
acggcatttgttcgcaatcagaatggtgcgatagctgaggcaattcgcatctggaagagt
aattttgacaaagagtttgaaggtgttgaggaatgccctatctgttacagcatcatccac
acaactaatcatagtcttccccggctggcttgcaaaacttgtaagcacaagttccactct
gcttgcctgtacaagtggttctcaacgtctcacaagtcgacatgcccactgtgtcagaca
ccattttga
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integrated database retrieval system
