Elaeis guineensis (African oil palm): 105044946
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Entry
105044946 CDS
T03921
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egu01009
]
105044946
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105044946
Enzymes [BR:
egu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105044946
Protein phosphatases and associated proteins [BR:
egu01009
]
HAD phosphatases
Fcp/Scp phosphatases
105044946
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105044946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
105044946
NCBI-ProteinID:
XP_010921352
UniProt:
A0A6I9R854
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All DBs
Position
5:complement(14221617..14228892)
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AA seq
681 aa
AA seq
DB search
MAEPPPSVTVANAIHRIQIALLDGATSSERQLFAAGALLSRPDYEDVVVERSIADHCGYP
LCPNPLPHDRPRKGRYRVSLREHKVYDLEETYKYCSPACVIASRAFAGSLSSERNSDLSA
SKVEQILELFHQGASLEEVLEKDGDLGLSKLTIREKADAGAGEVSLDEWMGPCDAIEGYV
PQQDRNKGLKVAATQKPSKRVEAVRQGELDFTSTMIVEDKLDGFSSSSVCTQDVSEAIAK
KLEDMDLLEKKTKATKTSSKSLKAKPTRKVNKSKNNQMDFKSVIVMGDEAQTSSVSTKNH
SEQFDFTSPMIIDQPSKTSFVELDNNLNNEVHLENELESLEIAQKELKDRVKMEKKETAL
KSSLKAAGSKVGRQTVKWADMEKDKAPEERKDGPEGNISTGALHGDDDGSSLRFASAEAC
AAALTQAAESVASGLSEAGDAVSEAGIVILPQPQHVKEGDAEADEDTFEFDRGFVKWPQK
TVLLDTDMFEVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGQNESSQDDF
LLVNGREYPHKTVLGDGKSLEIRQTIDGFVCRALPSIVMDLKLPTPVSTLEKFVGRLLDT
MSFVDALPSFRIRQWQVIVLLFLDALSVHRLPPLAPHMTNRNMLLHKVLNPAQVSAEEYE
SMRDLIIPLGRFPELSMQSGG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccccaccctccgttaccgtcgccaacgccatccaccgtatccagatcgcc
cttctcgacggcgccacctcctccgaacgccagctcttcgctgccggtgccctcctctcg
cggcccgactatgaagacgtcgtcgttgagcgctcaatcgccgatcactgcggctacccc
ctctgcccgaatcccctcccccacgaccgcccccggaagggccggtaccgggtctccctc
cgcgagcacaaggtctacgaccttgaggagacctacaagtactgctcccccgcctgcgtc
atcgcgagccgggccttcgcggggagcctcagcagcgagaggaactctgatttgagcgcg
tccaaggtggagcagattttggaattgtttcaccagggggcgtcattggaggaagttctg
gagaaagatggggatttggggctctccaagttgacgattcgggagaaggcggatgccggt
gcgggggaggtatcgttggacgagtggatgggtccttgcgatgccatcgagggctatgtt
ccccagcaggatcgcaacaaagggttgaaggttgcagccacacagaaaccgtcaaaaaga
gtggaggctgttagacagggcgaactggattttacaagtaccatgattgttgaagataag
cttgatgggttttcttcttcttcagtttgtacacaagatgtttcagaggcaatagcaaag
aagttggaagacatggatctgttagaaaagaagacaaaagcaactaaaacatcatcaaaa
tctttgaaggctaaacccacaagaaaggtaaacaaaagcaagaataatcaaatggatttt
aagagtgtcatagtcatgggagatgaggctcaaacatcctctgtgtcaactaaaaatcat
tcagaacagttcgattttacaagtcctatgatcattgatcagccttcaaagacatccttc
gttgagttagacaataatttgaataatgaggttcacttggaaaatgagctagaatccctg
gaaattgcacaaaaggagctgaaagatagagttaagatggaaaagaaggagactgcacta
aaatcttccttgaaggctgcggggtccaaggttggaaggcaaactgtcaagtgggctgat
atggaaaaagacaaggctccagaggaaagaaaggatggccctgaaggcaatataagcact
ggagctttacatggagatgatgatggcagttccttacggtttgcatcagctgaggcttgt
gcagctgcattgacacaggcagcagagtctgttgcttcaggcttgtctgaagctggagac
gcagtttctgaagctggaattgttatcttgccacaaccacaacatgtcaaagagggggat
gctgaggcagacgaggacacatttgagtttgataggggatttgtgaagtggcctcagaag
actgtgcttttagacactgacatgtttgaggttgaggactcatggcatgatacaccacca
gagggtttcagtttaacgttatcatcttttgcaacaatgtggatggcactttttggatgg
ataacatgttcttctttggcttacatatatgggcaaaatgaaagttcacaggatgatttc
ttattggttaatgggagagaatatccccacaagacagtcttgggagatggcaagtcatta
gaaattagacaaactatagatggatttgtttgccgtgccttgccaagcattgttatggat
ctcaagttgccaacacctgtttcaactttggagaaatttgtggggcgcttgctggacaca
atgtcatttgtagatgcactgccttccttcagaataaggcaatggcaagtgattgttctt
ttgtttcttgatgccctctctgtgcatagacttcctcctcttgccccgcatatgacaaac
aggaatatgctactacacaaggtgctaaatcctgcccaggttagtgcagaggagtatgaa
tccatgagagatctaataatcccattgggcagatttccagagttatccatgcaaagcggt
ggatag
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