Elaeis guineensis (African oil palm): 105045005
Help
Entry
105045005 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome B
KO
K12121
phytochrome B
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105045005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
105045005
NCBI-ProteinID:
XP_073113721
LinkDB
All DBs
Position
5:complement(15917451..15921536)
Genome browser
AA seq
995 aa
AA seq
DB search
MASGSRPTQSSGASNIRAGGGGSSHPSESVSKAIAQYTMDARLHAVFEQSGESGKSFNYS
QSVRTATPSQSVPEQQITAYLSKIQXGGNIQPFGATLAVDEPSFRLLAFSENAPDLLDLP
QSVPSLDTSSPHRRLALGSDVRSLFTPSSALLLDRAAAAREITLLNPLWIHSRASGKPXY
AILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQSLPGGDIKLLCDTVVD
HVRELTGYDRVMVYKFHEDEHGEVVSESRRDDLEPYLGLHYPATDIPQASRFLFKQNRVR
MIVDCNATPVRVIQDESLMQPLCLVGSTLRAPHGCHSQYMANMGSVASLALAVVINSSGD
DDGINRNAMKLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNMELQLAAQLSEKHIL
RTQTLLCDMLLRESPTGIVTQSPSIMDLVKCDGAALYYRGKYWPVGVTPTEAQIKDIVEW
LLACHGDSTGLSTDSLADAGYPGAAALGDAVCGMAVAYITPRDFLFWFRSHTAKEIKWGG
AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFREAAEGT
SNSKAIINGQFGDLELQGIDELSSVAREMVRLIETATAPIFAVDADGRINGWNAKIAELT
GLPVEEAMGKSLVKDLVFKESADVVDELLCRALRGEEDKNVELKLKTFGLQQSKNAIYVI
VNACSSRDYTNNIVGVCFVGQDVTGEKVVMDKFIHIQGDYKAIIHSPNPLIPPIFASDEN
TCCSEWNTAMEKLTGWSRGEMIGKLVVGEAFGSCCRLKGPNALTKFMIVLHNAIGGHESD
KFPLXFFDKNGKFVQALLTAHTRSNMDGQIIGAFCFLQIASPELQQALEIQRQQEKKCYA
RMKELVYICQEMKNPLSGIQFTNSLLEXDDLTDDQKQFLETSASCERQMMKIIKDVNLQS
IEMGKYFFPLQFGKYAVLCPFYNFLFPCFYSTGYG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggtagccggccgacgcagtcttccggcgcgagcaacatccgggccggcggc
ggcggctcttcgcatccgtcggagtcggtgagtaaggcgatcgcccagtacaccatggac
gcccgactccacgcggtcttcgagcagtccggggagtccggcaagtccttcaattactcc
cagtcggtgcgcacggcgacgccgtcgcagtcggtcccggagcagcagatcacggcgtac
ctctccaagatccagncgggcggaaatatccagcccttcggcgctacccttgccgtcgac
gagccctccttccgcctccttgctttctccgagaacgcccccgacctcctcgacctcccc
cagtccgtcccctccctcgacacctcctcccctcaccgccgcctcgccctcggctccgac
gtccgctccctcttcaccccctcctccgcccttctcctcgaccgcgccgccgctgcacgc
gagatcaccctcctcaaccccctatggatccactcccgcgcctccggcaagcctntctac
gccatccttcacagaatcgatgtcggaatcgtcatcgatctcgaacctgcgcgcaccgag
gaccctgctctctccatcgccggcgccgtccagtcccagaagctcgccgtccgggcaatt
tcccgcctccagtcgctccccggcggcgacatcaaacttctctgcgacaccgtcgtcgac
cacgtccgcgagctcaccggatacgaccgcgtcatggtgtacaagttccacgaggacgag
cacggggaggtcgtctccgagagccgccgcgacgacctcgagccctacctcggcctccac
tacccggccaccgacatcccccaggcctcccgcttcctcttcaagcagaaccgcgtccgg
atgatcgtcgactgcaacgccacccccgtccgggtgattcaagacgagagcttgatgcag
ccgctctgcctcgtgggctccaccctccgggcgccgcacggctgccactctcagtacatg
gccaacatgggctccgtcgcctcccttgccttggccgtcgtcatcaacagcagcggcgac
gacgacggcatcaaccgcaacgccatgaagctctggggcctcgtcgtctgccaccacacc
tcccctcgctccatcccctttccactccgctatgcctgcgagttcctcatgcaggccttc
ggcctccagctgaacatggagctccaattggcagcgcaattatccgagaagcacatcctc
aggacccagaccctgctctgcgatatgctcctccgcgaatcgccgaccggaatcgtcacc
cagagccccagcataatggacttggtgaagtgcgacggagctgccctctactaccggggg
aagtactggccggtcggtgtcactccgacggaagctcagataaaggatatagtggaatgg
ctgttggcttgtcatggggactcgacggggctgagcaccgacagtttggcggatgctggc
tatccaggcgcggcggcgctcggggacgcggtctgtgggatggctgttgcctatatcact
ccaagagactttttgttttggttcaggtcacatacagcgaaggagatcaagtggggtggt
gcgaagcatcacccggaggacaaggatgatgggcagaggatgcaccctcggtcatcgttt
aaggcattcttggaagtggttaagagcaggagcttgccatgggagaatgcggagatggat
gccatacattcgttgcagctcatcctgagggattcttttcgggaagcagcggaggggacc
agcaattcaaaggcaatcatcaatggtcaatttggggacctggagttgcaagggatagat
gagctcagctcggttgcacgggagatggtaaggttgatagagacggcaactgctcccatc
tttgcagttgacgcagatggacgtatcaatggttggaatgcgaagattgctgaattgaca
gggctcccagtggaggaagctatgggtaaatcactggttaaggatcttgtcttcaaggag
tcagcggatgttgtcgatgagcttctctgccgggccttgagaggtgaagaagataagaat
gtggagctaaagctgaagacttttggcttgcaacaatcaaagaatgctatttatgtcata
gtaaatgcttgttctagtagagactacacaaataatattgtaggtgtgtgttttgttggc
caggatgttactggagagaaagtggtcatggataaattcattcacatacaaggtgattat
aaggctatcatacatagtcctaaccctctaattccccccatatttgcttcggacgagaac
acgtgttgctcagagtggaacacagcaatggaaaagcttactggttggtcaagaggggaa
atgattggaaagcttgtggttggtgaagcttttggcagctgctgtcgactcaagggtccg
aatgctcttacaaaattcatgattgtccttcacaatgccattggaggacatgaatcagac
aaattccctttgncattctttgacaagaatggcaaatttgtacaggcgcttctgacagca
cacacaagaagtaatatggacggccagataattggagccttttgcttcttgcagatagct
agccctgaactgcagcaagctcttgaaatccagaggcagcaggaaaagaaatgctatgca
agaatgaaagaactggtttacatttgccaagagatgaaaaatccacttagtggtattcaa
ttcacaaactcactgttggagnatgacgacttaactgatgatcagaagcagttccttgaa
actagtgcttcatgtgagagacagatgatgaagatcataaaggatgtgaacctacaaagt
attgagatgggtaagtatttttttccacttcaatttggaaagtatgctgtactctgtcca
ttttacaattttttatttccatgtttttattctaccggatatggataa
DBGET
integrated database retrieval system
