Elaeis guineensis (African oil palm): 105045060
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Entry
105045060 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105045060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egu03032
]
105045060
03400 DNA repair and recombination proteins [BR:
egu03400
]
105045060
DNA replication proteins [BR:
egu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105045060
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105045060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
105045060
NCBI-ProteinID:
XP_010921524
UniProt:
A0A6I9RDD0
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Position
5:complement(17569326..17583305)
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AA seq
1181 aa
AA seq
DB search
MIRSRGASTSRSPEKIFAGVRFVLFGFDSVSEAQYRSELVRRGGVDVGRYDLSCTHVVVS
GRVYDDPVCVAARNDGKILVTELWIDDSVDFGTLAEPTRILYQPVKDLNGIPGSESLFIC
LTGYQRPERDDIMKMVSLMGGRFSKPLIANQVTHLICYKFEGEKYELAKKVNIKLVNHRW
LEDCLKAWEILPTDDYTKSGWELEILEAEAEDSEEETEDGTRVLGQKKHAGNSTFQGGMS
VSVHSDVSIPSMGTIGIHKDAGASKQPRSADDSCMNSRLFTTPCKETGSGQALGMSDQSN
KVQEEFSHHNAGGFEQAGDGYDGGLTFIPCDTNLNKQDDKFSTAKIGSTSSALAEKSGSL
SYSRRIPKSVLPEELSNNSLSSPLGVMKENTPSVLREGRMNDDPADIQGAAANATIHQTE
AISNGLPQKRKISVTRVGSKSPKSECQGSKSSSPQSPLAYIRSVQLEPTTAIPQDKSDIA
PRNINSPVEEAGDSNSVANQSKPSLSYRKKSLKCGQPGSATKIIDSASLPSDDKEADLPS
LRRATGESVVRQLPNLKSTITSGKVSPADSKLLPDLLHDSEPRPAADKHASLRNTVNHFE
SLAIEGRIAEESSKEKIPEVSFGGLGESECAIKCDNRDNAMNDLPSAKEPPELHKPRQDE
VALSPNRREPETRKASSTASSDTCKGNNKKAASGAHIKQAVAKRTMNGRPKLTAGSTRKD
MVVTNSDKPATLDKAGVGSGKAEVGSNLELEKAASDEINGAAQSVPEDVVMEDRMEVARH
LIRASNNKNVAMDWMAASMDPEKENKPEKDGSLTFKSNGNQSRKMMPQHDGKLMQKNKDA
AAVDTKKMQTRKDGRVISLEPVWFILSGHRLQRKEFQMVIRRLAGRVCRDSHNWSYQATH
FIAPDPVRRTEKFFAAAAAGRWILKTDYLTASNEAGRFLDEQXFEWYRNGLTEDGAISLE
APRKWRLLRERTGHGAFHGMQIIVYGECIAPTLDTLKRVVKXGDGTILATSPPYTRFLRS
GGVDYAVVSPSMPRVDLWVQEFLRHEIPCVVADYLVEYVCKPGYSLERHVLYNSHAWAEK
SFANLLSRSEEIIADASTSTPSKENNDDLSCSVCGSRDRGEVMLICGDEGGTVGCGIGTH
IDCCDPPLDEVPDGDWFCSKCNTDASNTPYKGSKRSSRKLE
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattcgatctcgaggcgcttccacttcgagaagccctgaaaagatctttgccggtgtt
cgcttcgttctcttcgggttcgattccgtctccgaagcccagtaccgatcggagcttgtt
cgaagagggggcgtcgatgttgggcggtacgatttgagttgtactcatgtggttgtgtcg
ggccgtgtttatgatgatcctgtgtgtgtcgctgctcggaatgatgggaaaatccttgtc
acggagttgtggatcgatgatagtgtggattttgggacactagcagaacccaccaggatt
ttatatcagcctgtaaaagatttgaatggtataccaggcagtgagtccctgtttatttgc
ttgacaggatatcaaaggccagaacgcgatgatatcatgaaaatggtgtccttgatgggt
ggtaggttttccaagcctctgatagcaaaccaagtcactcatcttatatgctacaaattt
gaaggcgagaaatatgaattggccaaaaaagtgaatatcaaactcgtcaatcatcgatgg
ctggaagactgcttaaaagcatgggaaatactaccaacagatgactatactaaaagtggc
tgggaattagagattttggaggctgaggccgaggattcggaagaagaaactgaggatggc
acaagggtcttgggtcagaagaaacatgcagggaattctaccttccagggtgggatgtcg
gtctctgtgcattctgatgtgtctattccatctatgggaacaattggcatccataaagat
gctggagcatcaaaacagccacgcagtgctgatgattcttgcatgaacagtaggttgttt
actacaccatgcaaggagactggttctggacaagctttgggcatgtctgaccagagcaac
aaggttcaggaggagtttagtcatcacaatgcagggggctttgagcaagcaggtgatggt
tatgatggtgggttaacattcattccatgtgatactaacttaaataaacaagacgacaaa
ttctcgacagctaaaataggttcaacatccagtgcattagctgagaaatccggtagtcta
agttactcgagaagaattcctaagtcagttttaccagaagaactgtcaaataactcactt
tcatctcctctaggggtcatgaaagaaaatacaccatcagtgctaagggaaggtagaatg
aatgatgaccctgctgacattcaaggtgcagcagctaatgcaacaatacatcaaacagaa
gcaatcagcaatggtttgccccagaagaggaagatttctgtaacaagagttggctccaag
tctcctaagtcagaatgtcagggttcaaaaagctcttcccctcagagtcccttggcatac
attaggtctgtccagttggaacctacaactgctatacctcaggacaaaagtgatattgct
ccaagaaatataaacagcccagtggaagaggctggtgattcaaattctgtggcaaaccaa
tccaaaccatcattaagttacaggaagaagtctctcaaatgtgggcagcctggttcagcg
accaaaatcattgatagtgcaagcttgccttcggatgataaggaggcagatttgccaagc
ttgaggcgagcaacaggtgaaagtgttgtgaggcagttgcctaacttgaaatctacaatt
acaagtggaaaggtttctcctgcagatagcaagcttcttccagatttgttgcatgatagt
gagccaagaccggcagcagacaagcatgccagcttaagaaacacagtaaaccactttgag
tcattggcaattgaaggcagaattgcagaagagtcttcaaaggagaagatacctgaggta
tcttttggtggtttaggggaatctgaatgtgccattaaatgtgataatcgtgataatgca
atgaatgatttgccaagtgccaaagaacctccagaattgcataaaccaaggcaagatgag
gtggcactatctcctaataggagggaaccagaaaccagaaaggcatcgagcactgctagt
tctgacacatgtaaaggaaacaataagaaagcagcatctggtgcacacatcaaacaggct
gtcgcaaaaaggactatgaatggtagacctaaactcactgcaggcagtactaggaaagac
atggtagttaccaattcagataaacctgccaccttggacaaggctggagttggatcaggg
aaagcggaggtgggtagcaatctggaacttgagaaggcagccagtgacgagataaatggg
gcagctcaatcagtgcccgaagatgttgtcatggaagacaggatggaagtggcacggcat
cttattcgtgcaagcaacaataagaatgtagccatggattggatggcggcatcaatggat
ccagaaaaggagaacaaaccagaaaaggatggcagtttgacttttaagtcaaatggcaat
caaagtcgtaaaatgatgccccaacatgacggaaaattgatgcaaaagaataaagatgct
gctgctgttgataccaagaagatgcaaacaaggaaggatggaagagttattagtttggaa
cctgtatggtttattttaagcggtcatcgccttcagagaaaagagttccaaatggtaatc
agacgtcttgcgggaagggtttgcagggattctcataattggtcctatcaagctacacat
tttatcgccccagatccagttcgcaggactgagaagttctttgcagctgctgccgctgga
aggtggattctaaagacagactacttgactgctagtaatgaggctggaaggttcttggac
gaacaancttttgaatggtacaggaacggcctcactgaagatggtgctatcagtttagaa
gctccaaggaaatggcgccttttgagggaaagaacaggtcatggtgccttccatggaatg
caaattattgtttatggagagtgcattgcgcccactctggacacattgaagcgtgtggtg
aagngcggagatggcaccatcttagcaacctcccctccttacactcgctttctgaggtct
ggtggtgttgattatgccgttgtcagcccaagcatgccacgtgttgacttgtgggtgcaa
gagttcttgaggcatgagatcccgtgtgtggtggctgattatttggtggagtatgtatgc
aagcctggttactctcttgagaggcatgtactctacaattcacatgcttgggctgagaaa
tcttttgcaaatttgttgagccgttctgaagagattattgctgatgcctcgacgtcgacg
ccatctaaagaaaacaatgatgatctcagctgctcagtctgtgggtcacgagatagagga
gaggtaatgcttatttgtggagatgagggtggtacagttgggtgtggaattggtactcat
attgattgctgtgatcccccactcgacgaagtaccagatggagactggttctgctccaaa
tgtaacactgatgcctccaatactccctataagggtagtaaacgatcttcacgcaaactt
gagtga
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