Elaeis guineensis (African oil palm): 105045237
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Entry
105045237 CDS
T03921
Name
(RefSeq) probable chromatin-remodeling complex ATPase chain isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105045237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105045237
03036 Chromosome and associated proteins [BR:
egu03036
]
105045237
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
105045237
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
105045237
RSF complex
105045237
WICH complex
105045237
B-WICH complex
105045237
NORC complex
105045237
BRF complex
105045237
NuRF complex (fruit fly)
105045237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
HDA2-3
DEAD
DBINO
CHDII_SANT-like
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
105045237
NCBI-ProteinID:
XP_019706368
UniProt:
A0A6J0PJ72
LinkDB
All DBs
Position
5:complement(30587812..30604025)
Genome browser
AA seq
1085 aa
AA seq
DB search
MAKPSNSEDLSEETPSNGSISSEEEQKIEAEANQEEEDDDEELEDVARTASPDDDEAGGD
GDDSTEDDEAVAEANDFEDETVEPSENAAIGKRERARLREMQRLKKQKIEEILAQQNAAI
DADMNNKGKGRLKYLLQQTEIFAHFANGIQSASEKKPRGRGRHASKVTEEEEDEEYLKEE
EGGFSIGGGTRLVSQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTIS
LLGYLHEFRGITGPHMVVAPKSTLGNWMREIRRFCPVLRAVKFLGNPDERKHIRENLLVA
GKFDVCVTSFEMAIKEKNALRRFSWRYVIIDEAHRIKNENSLLSKTMRLYKTNYRLLITG
TPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLK
SDVEKGLPPKKETILKVGMSQMQKHYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNH
PYLFQGAEPGPPYTTGEHLITNAGKMVLLDKLLAKLKERDSRVLIFSQMTRLLDILEDYL
MFRGYQYCRIDGNTGGEERDASIEAFNQPGSEKFIFLLSTRAGGLGINLATADVVILYDS
DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAE
QKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELDAKMKKFTEDAIQ
FKMDDTADLYDFDDEKDDNKTDFKKLVTENWVEPSRRERKKNYSDSDYFKQALRQGGPAR
AREPRIPRMPQLHDFQFFNTKRLSELYEKEVRYLMQTHQRNQSKDTIGDSDEFEDLSEPL
TMEEQEEKERLLEEGFSTWTRRDFNTFIRACEKYGRNDIKSIASDMEGKTEEEVERYAKV
FRERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKL
YNEECDRFMLCMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVE
KENQEYDERERQARKDKKLAKNQTPSKRSMSRSAAVETPALASFKRRRQAVMDDHVTPGG
RRRRG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccctcgaattctgaggatctctccgaggaaacaccctccaatggctcgatc
tcctccgaggaggagcagaagatcgaggccgaggcgaaccaggaagaggaggacgacgac
gaggagctcgaggacgtcgcgcggacggcgagccccgacgatgacgaggccggaggagat
ggcgatgactcgaccgaggatgatgaggccgtcgccgaggcaaacgatttcgaagacgag
actgtggaaccatctgaaaatgctgcaattggaaagcgcgagagagccaggctaagagag
atgcaaaggctgaagaagcaaaagattgaggaaatactggctcaacaaaatgctgccatt
gatgctgacatgaacaataaagggaaggggcggctgaagtatttgctgcaacagacggaa
atattcgctcattttgctaatggcattcaatctgcatcggagaagaagccaagaggaagg
gggcgtcatgcatcaaaagtaaccgaggaggaagaggacgaagaatacctgaaggaggaa
gaaggtggtttctcgattggaggagggactcgtttggtttcacaaccatcttgtatacaa
gggaaaatgagagattaccagctggctggattaaattggctgataaggttgtacgaaaat
ggaatcaatggaattctggctgatgagatgggtctcgggaaaacattgcaaaccatctct
ttactgggctatttgcatgagttcagagggattacagggcctcacatggtggtagcaccg
aaatccactcttggcaactggatgagggagattcgacgcttctgtcctgttttgcgtgct
gtaaagtttcttggtaacccagatgaaaggaaacatatacgcgaaaatttattagtggct
ggaaagttcgatgtatgtgtaactagttttgaaatggccatcaaagagaaaaatgcccta
aggcgctttagttggcgatatgttattatcgatgaggctcatcggataaaaaatgagaac
tctcttctttctaaaacaatgagactctataaaacaaactatcgcctccttattacgggt
acacctcttcagaacaatctgcatgagctctggtcccttcttaattttctacttcctgag
atatttagttcagctgaaaccttcgatgaatggtttcaaatatctggggaaaatgatcag
caagaggttgtccagcagcttcacaaggttcttcgtccatttctcctccgtagactaaaa
tctgatgttgaaaaaggtttacctccaaagaaggaaactatactcaaagtaggaatgtcc
cagatgcagaagcactattatcgtgctctgcttcagaaagatctggaagtcattaatgct
ggaggagaacgtaaacgtcttctaaacatagctatgcagctgcgtaagtgttgtaatcat
ccatatctgttccaaggcgcagagcctggcccaccttatacgacaggggaacatcttatt
acaaatgctggaaaaatggttcttctagataaacttctggctaagttaaaagagcgtgat
tccagggttctaatattttcacagatgactaggcttttggatatcctggaggattatttg
atgtttcgtggataccaatactgtcggattgatggtaatactggtggggaagaacgtgat
gcttctattgaagccttcaatcagccggggagtgaaaagttcattttcttgctttcaacc
agagctggtgggctggggattaaccttgccactgcagatgttgttattctttatgacagt
gattggaaccctcaggttgatttgcaagcacaagatcgtgctcacaggattggtcagaaa
aaggaagttcaagtgttccgtttctgcaccgagtatactattgaagaaaaagtgatcgag
agggcatataagaaacttgcgcttgatgctttggtgatccaacaaggtcgattagcagag
cagaaagctgttaataaagatgaattgttgcaaatggtgagatttggtgctgagatggtc
ttcagctccaaggacagtacaataactgatgaggatattgaccgtatcatagctaaagga
gaggagacaacagctgagcttgatgctaaaatgaagaagtttacggaggatgctatccag
tttaaaatggatgatactgctgacctttatgacttcgatgatgagaaggatgataacaaa
actgactttaagaaacttgttactgagaactgggtagaaccttcaagaagggaaaggaaa
aaaaattactcagactctgattacttcaagcaagcattgcggcaaggtggaccagcaaga
gcaagagagccacggattcctcgcatgcctcagttacatgacttccagtttttcaacaca
aagaggttaagtgaattgtatgaaaaagaagtgcggtatcttatgcaaacacatcaaagg
aatcagtcaaaggacaccattggtgatagtgatgaatttgaagacttgagtgaacccttg
accatggaggaacaggaagaaaaggagcggttgctagaagagggtttttcaacatggaca
aggagagacttcaatacatttattcgggcatgtgaaaaatatggccgcaatgacataaaa
agtatagcttctgatatggagggcaaaacagaagaagaggtagaaagatatgctaaagtc
ttcagagagagatacaaggaattgaatgactatgatagaataatcaagaacatagaaaga
ggagaggcaagaatctctcgcaaagatgagataatgaaggcaattgggaaaaagttagat
cgttacaagaatccttggttagaattgaagattcagtatggccaaaacaaagggaagttg
tacaatgaagaatgtgaccgcttcatgttatgcatggttcacaaacttggatatgggaat
tgggatgagctgaaagcagcattccgtacttcacctttattccgttttgattggtttgtg
aagtcccgcactacacaagagctcgccaggcggtgtgatacactgattcgtctggtggag
aaagaaaatcaggaatatgatgagcgagagaggcaagctcgcaaagataaaaaacttgct
aagaaccagacaccatcgaagcggtccatgtcaaggtcagcagctgtggaaacccctgca
cttgcttctttcaagagacgaaggcaagcagtgatggatgaccatgtaaccccgggggga
aggaggaggaggggatga
DBGET
integrated database retrieval system
