Elaeis guineensis (African oil palm): 105045259
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Entry
105045259 CDS
T03921
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03013
Nucleocytoplasmic transport
egu03015
mRNA surveillance pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105045259
09122 Translation
03013 Nucleocytoplasmic transport
105045259
03015 mRNA surveillance pathway
105045259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105045259
03041 Spliceosome [BR:
egu03041
]
105045259
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105045259
Spliceosome [BR:
egu03041
]
Common components
Common spliceosomal components
Cap binding complex
105045259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Golgin_A5
DUF7935
PV-1
Motif
Other DBs
NCBI-GeneID:
105045259
NCBI-ProteinID:
XP_073113912
UniProt:
A0ACM7CHY9
LinkDB
All DBs
Position
5:28440136..28474110
Genome browser
AA seq
863 aa
AA seq
DB search
MSTWRTLLLRIGDRCPDYGGTTDFKEHIETCYSVIWREFEHSKDGIFELLLQCAEQLPHK
IPLYGVLVGLINLENEDFAKRVVDTTCSSFQDSLYSENYNRIRLLLRFLTGLMCSKVILP
GSIIEAFETLLSSAATTVDEEAGNPSWQPRADFYITCILSCLPWGGAELIEQVPDEFERV
MIGVQSYISIRRHTQDIGFTVFDSDEDKLLEEKDFLEDLWDRIQVLSNNGWKIDSVPRPH
LSFEAQLVAGKSHSLSSISCPEPPEPLDIHYTASRGKEKHQAWLKYPQRLRRLNIFSSDK
TEDMQPIDRFVVEEYLLDVLLFFNGCRKECASCMVGLPVPFRYEYLMAETIFSQLLLLPQ
PPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFERIGDLDMECRTRLILWFSHHLSNF
QYIWPWEEWAHVKDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSIENASALEELLPPRGE
PNFKYSTEDSQEGMDGSTLSKEFSSMVRARKTAREITLWVEENIIPVHGFNVSLEVVIQT
LLDIGSKSFTHLITVLERYGQVIAKLCPDHDKQVLLIDEVSSYWKNNTQMTAITIDRMMS
YRLISNLSIVRWVFSLSSVNQFHISDRPWEILRNAINKTYNRITDLRKEIQSLERSVLLA
EEATRKAINEYEAAESKLEVVDGQPVQSEKPGRLKRLKGYAEKAKDDETSMRESLEAKEA
LLARAVEENKVLFLSLYKSFRDVLMERLPPVSADGKLPKLRTANVDLMAVDSEEPSTMEV
DHDNGRTDASQSNGEGVFPRYSTGEHEQWCLCTLGYVKAFSRQYATEIWAHIETLDSQVF
AEDVHPLFRKAAYAGLCRLTTEL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctggcggacgcttctgctgcggatcggcgaccggtgcccggactacggtggc
accaccgacttcaaagaacacatcgaaacatgctatagtgtaatatggcgagaatttgag
cattccaaagatggcatctttgagctccttcttcaatgtgctgaacagctaccgcacaaa
attcctttgtatggagtactggttggtttgataaacttagaaaatgaggactttgctaag
agggtggtagataccacatgttctagcttccaggattcattatattcagaaaattataac
aggattcgtcttttgttgcggtttctcactggactgatgtgcagcaaagttatcttgcct
ggttcaattattgaggcctttgagacactgttgtcatctgctgcaacaacagtagatgag
gaggcaggaaatccttcttggcaaccacgtgctgacttttacatcacttgtattttgtcc
tgccttccatggggaggtgcagaactcattgagcaagttccagacgagtttgagagagta
atgattggtgtacaatcttatataagcatcagaaggcacacgcaagacattggtttcaca
gtttttgattctgatgaggacaaattgcttgaggaaaaggattttttagaagatttatgg
gaccgtatacaagttctttcgaacaatggatggaaaattgatagtgttccaagacctcac
ctatcttttgaagcacaattagtagcaggaaaatctcacagtctttcttctatcagttgc
cctgagccacctgaacccttagatatacattatacagcctcgagaggaaaagaaaagcat
caagcctggttgaagtatcctcagaggcttcgcaggcttaacatattttcttcagataaa
actgaggacatgcaaccaattgatcgttttgttgttgaagaatatttgctggatgtgctt
cttttctttaatggatgccgaaaggaatgtgcttcgtgcatggttggtctgcctgtacca
ttccgctatgaatatctgatggcagagactattttttctcagctactattgctgccgcag
ccaccatttaagccaatatactatacactggttatcatcgacctttgcaaggcgctccca
ggggcattccctgctgttgtagcaggagctgtacgtgctctttttgagagaattggtgat
ttggacatggagtgccgcactaggctcattttatggttttctcatcacttatcaaatttc
caatacatttggccatgggaagaatgggcgcatgttaaagatcttccaaaatgggcccca
caacgggtttttgttcaagaagtattagaaagggaagttcgtttgtcatactgggacaaa
atcaagcagagtattgaaaatgcctctgctttagaggaattgcttcccccaaggggtgag
cctaacttcaagtatagtactgaagatagtcaagaaggcatggatggctccacactttct
aaggagtttagcagcatggttagggcaaggaagactgctcgtgagattactttatgggta
gaggagaatataattccagtgcatggctttaatgtttcacttgaagttgtcatccagact
cttcttgatattggttcaaaaagtttcactcatttaatcacagttttggagagatatggt
caagtcatagctaagttatgtcctgatcatgataagcaagttttgctaatagacgaagtc
agttcgtactggaagaacaatactcagatgactgctatcactattgacagaatgatgagt
taccgactcatatccaatttgtcaattgttagatgggttttttctctttctagtgtcaac
caattccatatttcagatcgtccatgggagattcttaggaatgccatcaacaagacgtac
aatcgcattaccgatcttagaaaggaaatccaatcactcgaaaggagtgttctattagct
gaggaagccacaagaaaggctataaatgagtacgaagctgctgaatcaaagctcgaggtt
gtggatggtcaacctgtacagtctgaaaaaccaggaaggttaaaacgacttaaaggatat
gcggagaaagcaaaagatgatgagacatctatgcgagaatctttggaagctaaggaggct
cttcttgcccgagctgttgaagaaaataaagtgttgtttttgtcattatacaagagcttc
agagatgtgcttatggaacgcctgcctcctgtgtctgctgatggaaaattgcccaaacta
aggactgccaatgttgatttgatggctgttgactcggaggagccatcaactatggaggtg
gaccatgacaacggaagaactgatgctagtcaatcaaatggtgaaggagtatttcctcgc
tattccactggggagcatgagcagtggtgcctttgcacgttgggctatgtcaaggcattt
tcgaggcaatatgcaactgagatctgggctcatattgaaacactggactctcaagtcttt
gctgaagacgtccatccactttttcgcaaagctgcttatgcaggtttatgccgacttacc
actgaattgtga
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