Elaeis guineensis (African oil palm): 105045571
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Entry
105045571 CDS
T03921
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105045571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105045571
Enzymes [BR:
egu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105045571
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105045571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105045571
NCBI-ProteinID:
XP_010922210
UniProt:
A0A6I9REW3
LinkDB
All DBs
Position
5:37429253..37449682
Genome browser
AA seq
1674 aa
AA seq
DB search
MADIRSEEAASEVVDSVRFRFYTAEEIRRISVKKITKPDLLDSKNAPVPDGLYDPAMGPI
NDTDSCKSCGQLSFRCPGHCGHIDLAKPLYNPLLFRNLQNLLQITCFFCRRFRLNEEKVQ
RYAEQLDLIAKGDVVGARTLEAHSWGEYYFPDGGETESAVISTNESLLKITNLKQQQTWT
SLQYSEAISIMSKFLREKSKKCANCGRKNPTITSPTFGWLNKAMQASDIRTNFIIGYDLG
LSSTEDQNAEGSQPRGDSASQTDEEPSSTAKVEGKTKKQSRNLQKTKKQSRDLPPEIAKQ
ILSSGQKKHLLPSEVEAILKDLWKNQAKICALICDLQRRSLNASGRDKGYAMFFLKTLLV
PPSKFRPPAGSGTRGVLEHPQNVLLSKVQESNIALRNVITDGPDHPDIVRRWMDLQRNVN
VLFDSTKGWVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGI
PPYFALRLTYPERVTPWNVNKLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNAISR
KLPTSKGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEK
TLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQD
HIVSAVLLTKLDTFLTREEYHQLLYASFMPPIASSQPGRFGRKVCTLSSDAEIQPLLPAI
WKPIPLWTGKQVITAILNHITRGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDLIHGM
VDKAQFGKYGLVHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDME
RKRILEKSEALSEDVHIRFTAFKDGDRDPVKLQREIEKTLCRNRESATASLDRMMSSSMN
VLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMV
SGKTLPCFPPWDISCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQR
CLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLS
SQLEDAHLSKSNGYLKELPYLLRENATTFARLSKNHQGSLRQIRRKDLMKLMKLKYLSSL
AEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIRTPVM
KCPLHDGRTREAAEQLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPE
LYPPHSDLTLEDCMTTLRTYFIDAMEDAIAKHLDMICKISDINSVTAKGESNLEEGTDED
EHGSKSTHREDKDNSRGFDDVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIEKENSAKA
DEHDGETQSGFESEIDQVEADEDYTVGGDPSMEVEDPSLEAEETPESPSKAEPTPTLEDG
KKKQKLADNKESKSESKKKTTKPRKKKINRTIFVDAKGLTFEVHYIFKKEPRILLAEVAQ
KAAKSVYVKESKNIELCSVPEPKKDEPLSLQTAGVNFQAFWDLEDHLDINKITSNDIHAM
LNTYGVEAARATIIKEVKGVFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGMNNFNTS
PFGKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNLQL
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatccgatccgaagaggcagcatcagaggttgtggattcagttcgctttcgc
ttttatacagcagaagaaattcgaaggataagtgttaaaaagattaccaaacccgatctc
cttgattccaaaaatgctcccgttccagatggattgtatgatcctgcaatgggtccaatt
aatgataccgactcctgcaaatcttgtggccagctttcttttcgttgcccaggtcattgt
ggtcatattgaccttgcaaaaccactttataacccattgttatttaggaatcttcaaaat
cttcttcagattacttgcttcttttgccgtaggtttaggttaaatgaagaaaaggtccaa
agatatgctgaacaacttgatctcatagcaaagggtgatgttgttggggctagaacttta
gaagctcactcatggggtgaatattatttcccagatggaggagaaacagagtctgctgtt
atttctaccaatgaatctttgttaaaaataacgaatttgaaacaacaacagacatggacc
tcacttcagtattctgaggctatctccattatgtctaaatttttgagggaaaagtctaag
aagtgtgcaaattgtggtaggaaaaatccaacaattactagccctacatttggttggctc
aataaggctatgcaagcttctgatataagaactaatttcataatagggtatgatctgggt
ctgtcatccactgaggatcaaaatgctgaaggctcacagccaagaggagacagtgcttca
cagactgatgaagaaccatcgtccactgcaaaagtcgaaggaaaaactaaaaaacaatcg
aggaacctgcaaaaaactaaaaaacaatcgagggacctgcctcctgagattgctaagcag
atactatcttcaggacagaagaagcatctattaccttctgaggtggaagctattttgaaa
gatttgtggaagaatcaagccaaaatatgtgcacttatatgcgatcttcagcgtagaagt
ttgaatgcttctgggagggacaaaggatatgcaatgtttttcttgaagactcttcttgtt
ccaccaagcaaattccgtcctcctgctgggagtggtactcgtggggtgttggaacatcca
caaaatgttttgttaagtaaagtgcaagaatccaatattgctttaagaaatgtcattacc
gatggccctgatcatcccgatattgtgcggaggtggatggatcttcaaagaaatgttaat
gtgttgtttgatagtactaagggctgggttaaaactgagagggaagtcaatggtatacgt
caattattggagaagaaggcgggtatccttcgtcagaaaatgatgggaaagagggtcaat
tttgcatgtcgatctgttatatctccagatccatacttggcagtcaatgaaataggaatt
cctccatattttgcactgaggttaacatatcctgagcgagtgacaccctggaatgttaat
aagctacggtatgctatcatcaatggtgctgatattcatcctggagctacacattacaag
gacaaggagagaatgtataaattacaattaggtagaaacatgcgcaatgcaatttcaagg
aagctgcccacatcaaaaggagttcttgtgcagcaagggaagggtccagaatctgagttt
gaaggaaaggttgtctatcgtcatttacaagatggggatattgtacttgttaatcggcag
cctactcttcacaagcctagcatgatggctcatgttgttcgtgttctaaaaggagaaaag
acacttcgcatgcactatgctaattgcagcacctacaatgctgattttgatggagatgaa
atgaatgttcaccttccacaagacgaaatttctcgggctgaagccatcaacattgttaat
gcaaacaagcaatacgtcgttccaacaagtggggatccaattaggggtctgattcaggat
catatagtaagtgctgtacttctaacaaagttggacacatttttgacccgtgaggagtac
catcagcttttgtatgcttctttcatgcctcctattgccagttctcaacctggcagattt
ggtcgaaaagtttgcacattatcttcagatgctgagatacagcctcttcttcctgctatt
tggaagccaattccgctatggacaggaaaacaggtcataactgccattttaaatcatatt
acacgaggtcgacccccatttactgtggaaaataaaggcagaatccccaaggaatatctt
ggaaaagatcataatgaactgaagttacttatttacaagaatgatctgatacatggaatg
gttgacaaggctcaatttgggaaatatgggctggtccatacagtccatgaactctatggt
gcagacactgcaggcattttgctttcagttttcagtcgtctatttactttatttctccag
atgcatggatttacttgtggagtagatgaccttttacttgaccagagttcagatatggag
aggaaaagaatattagaaaaaagtgaagcactgagtgaagatgtccacatccgttttact
gcttttaaagatggggatagagacccagtaaaattacagagggagattgagaagacccta
tgtcggaatagagaatctgcaacagcatcgttggatagaatgatgtccagttctatgaat
gttctaacttctgaggtgaaccaaaccttatttccaagtggactacaaaagccctttctg
agaaattgtctctctcttatgaccacaactggagctaaaggtggtttggtcaacatgaca
caaatttcttctttgcttgggcaacaagagttggaagggaaacgagtcccacgtatggtt
tcaggaaaaacattaccctgctttcccccttgggatatttcatgtcgggctgggggattc
attagtgatcgctttttgactggtcttcgccctcaggagtattatttccactgcatggct
ggtcgtgatgggttggttgatacggctgtcaaaacatcgcgaagtggataccttcaacga
tgtcttgttaagaatcttgagtgtctgaaagtatcttatgatcatacagtacgtgatgca
gatggatctgttatccagtttatgtatggcgaagatggagttgatgtcctaaaaactagc
tttatttctgaattaggagcacttgctgctaatcagacggttgttcttgataggcttagt
agtcaacttgaagatgcgcatttgtcaaaatcaaatggttatcttaaggagttaccatat
ttgctgagagagaatgcaactacttttgctcgtctatcaaagaaccaccaaggctccctt
cgtcaaattaggcgaaaggacttgatgaaattaatgaagctcaaatacttgtcaagtctt
gctgagcctggtgaacctgttggtgtgattgctgctcaatctgttggagaaccatcaaca
caaatgacgctcaacacttttcatcttgctggccgaggggaaatgaatgtgactcttggt
attccacgcttacaagaaatcctgatgacagcatcagcagacattcgtactcctgttatg
aagtgtccattgcatgatggaaggaccagggaggctgccgaacagttggcttcaaagtta
aggagggtctgtttggcagacattgtagagagtatggaagtctgcagtgtgccattctgc
attcatgggaatgaggtgtcgacaatttataagctgaggatgaacctttacccacccgag
ctttaccccccacattcagacttaaccttagaagattgcatgacaaccttacgtacatac
tttattgatgctatggaagatgcaatagcaaaacacttggacatgatatgcaagatcagt
gacatcaactctgttactgcaaaaggagaaagtaacttagaagaagggacggatgaagat
gaacatggaagtaaatccactcacagggaggacaaggataatagcaggggctttgatgac
gttgatgatgatgatggaatcaatgaggatgaaggaatggatgctgaaaagaggaaaaaa
cgagctagtgatgaaatggaatatgaggatggtattgaaaaagagaactctgctaaagca
gatgagcatgatggagagacccaatctggatttgaaagtgaaattgatcaggttgaggct
gatgaggattatacagtgggaggagatcccagcatggaagttgaagatcctagcttggaa
gctgaggaaacacctgaaagcccatctaaagctgagcctactcccacattggaggatggc
aagaagaagcagaaactggcagacaacaaggaatcaaaatcagaatccaagaagaagaca
accaagccaaggaagaaaaagattaatagaaccatctttgtggatgcaaagggtttgaca
tttgaggttcactacatttttaagaaggagcctcgcattttactggctgaggttgctcag
aaggctgccaagtctgtctatgttaaggagtctaagaacattgaactgtgctcagtgcca
gagccaaagaaagatgagcccctctcacttcagactgcaggagtgaacttccaagcattt
tgggacctcgaagaccacttggatattaataaaataacctcaaatgatatacatgcaatg
ctaaacacgtatggtgtagaggcagccagagctaccattataaaagaggtgaagggtgtg
tttgatgcgtacggcatacgtgtaaatatccgtcacctgacactgattgcagacttcatg
actttccatggtgggtatcggccgatgaacagaatcgggatgaacaatttcaacacctca
ccttttggcaagatgactttcgagacggcaaccaagttcattgttggatcagctttccat
ggggaggtggataccttagatgccccttcggctagtgtctgccttggccagccagtgaag
atggggaccggatgttttgacttgatgcaaaatctgcagctctga
DBGET
integrated database retrieval system
