Elaeis guineensis (African oil palm): 105045598
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Entry
105045598 CDS
T03921
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105045598
03036 Chromosome and associated proteins [BR:
egu03036
]
105045598
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105045598
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105045598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HTH_44
Tex_central_region
HHH_9
SH2
Tex_N
S1
Motif
Other DBs
NCBI-GeneID:
105045598
NCBI-ProteinID:
XP_010922250
UniProt:
A0A6I9R8D1
LinkDB
All DBs
Position
5:complement(116437855..116452462)
Genome browser
AA seq
1768 aa
AA seq
DB search
MGGRAIVSDDEEEVEEEEDARALDRDDDDVNERDDEDEEDEEEEGQDEYEKDGFIVDDVE
EEEEEEEEEKQESDEERHRKKKKRKRRESERGGYVLDEDDYELIQESNITGFRRPKPDTS
YRRLRKAGRDTKTEEQSGFSDEEESERNSRGGRTAEEKLKQKLFGDDDAARLEDIVEEEE
QPEEEEDADVIGEEDEMADFIVDEDEVDETGAPVRRKQPKKRRPRQALGVSSSALQEAHE
IFGDVDELLMLRKQGLARGAGDSAGWGEKRLEDEFEPFIISEKYMTPKDDIIRETDIPER
IQVSEDITGPPPTDDKGIEEESAWIYNQLTGDGVSQLAGEDQVVKEIYKEDIGNVLTMMH
VQKLDVPFIAMYRKELCGSLLKDSDVNMQDGEEASRRMRWQKVLWAVHNLDKKWLLLQKR
KSALQTYYSKRFEEEKRRVYDMTRLELNDQLYKSVTDALNDAQSEREVDDVDAKFNLHFP
PGEVDIEEGQFKRPKRKSLYSICYKAGLWEVADKFGVKSEQFGLLLSREEVGLPELEDGK
QTPEEIAANFTCAMFETPQDVLKGARHMAAVEISCEPIVRKHVRTTFMDKAVVSTSPTPE
GNVTIDPYHQLSGVKWLRNKPLSKFVDAQWLLIQKAEEEKLLQVTIKLPEDVQKKLLNDA
KEVYLSECVSRSAQLWNEQRKMILEDSFFTYILPSMEKEARSLLAAGAKNWLLMEYGKQL
WNKVSVAPFKRKDADNDSEDESELRVMACCWGPGKPATTFVMLDSAGEMVDVLYAGSISS
RSQAVAEQQRKKNDQQRVLKFMTDHQPHAVCVGAANLSCRQLKDDIYEVIFKIVEDHPRD
VSGEIENFHIVFGDESLPRLYENSRVSSDQLPGQPGIVKRAVALGRYLQNPLAMVATLCG
PGKEILSWKLCPLEHFLTPDEKYEVVEQVMVDATNQVGVDVNLAASHEWLFAPLQFVSGL
GPRKASALQRAFVRAGSIFNRKEIPMGKILRKKVFINAVGFLRVRRSGAAAASSHIMDLL
DDTRIHPESYDLAKKLAKDVYAEDAPQEPHEMDDDVQEMAIEHVRERPHMLKALDIDEYA
NSHFRDSGTRKRETLYDIKMELLNGFQDWRMPYTDPNPEEEFTMLSGETEDTISEGRIVQ
VTVRHMQDNRIICAFDSGLKGLIMADDISDDGYDPERLQIQEGDILTCKIKNVNKNRFVV
YLTCKSSELRKRLYFIRNRDPYYYEDEISLRSDQDKARKEKELAKKHFKPRMIVHPRFQN
LTADEAMEYLSDKEAGESIIRPSSKGPSFLTLTLKIFDGVYAHKDIVEGGKDHKDITSLL
RLGKTLTIDKDTFEDLDEVMDRYVDPLVNHLKNMLAYRKFRRGTKAEVDELLKAEKAENP
MRIVYCFGISHEYPGTFILSYIRSSNPHHEYIGLYPKGFRFRKRDFDDIDRLVAYFQKNI
DKPPPDAGPSLRTVAAMVPMKSPAWVGSGSAGSGSAGGNDGWRGQTSLDRERSSTPGSRT
GGRFDSRNNSGGRDGHPSGLPRPGRGRGRGRGNHFAGSSDFGSAKWGSGSKDEDDGLNSF
PGAKVQNSPGRERFPGGWGGGGSGGSGGWSGNNRTGNDGDGWGSSSAAGSGGGRDGGTGG
WSGGGSAGGGWVEGGNSGSGGGSGWGGGGRSSGGGGGGGGEWGSAANSSGGGINAWGTSG
NGGGNWGASGNGGGGGGRVSGGSGSSGGGGGGGGRGGWGGEAAASKGLGGSDSGFGAGSS
GWGDSKRVVPPQADATGGWSGGSGGGGW
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaagagcgatcgtctccgacgacgaagaggaggtcgaagaggaagaggatgca
cgagctttggacagggatgacgatgatgtcaatgagagggacgacgaggatgaggaggac
gaggaagaagagggacaggatgagtacgagaaagatggtttcatagtggatgacgtcgag
gaggaggaggaagaagaagaggaagagaagcaagagagtgatgaggaaaggcacaggaag
aagaaaaagaggaagagaagagagtcagagagaggaggctatgtgcttgatgaggatgac
tacgagttgattcaggaaagcaacatcactggcttccgtcggcccaagcctgatacatca
tataggcgcttgaggaaggcaggaagggataccaagacggaggagcagtctgggttttca
gatgaagaagaatctgagagaaatagtcgaggcggccggactgctgaggaaaaacttaag
cagaaattgtttggtgatgatgatgcggcacggctggaggatattgtggaagaagaagag
caaccagaagaggaggaagatgcagatgtcattggtgaggaagatgagatggctgatttc
attgttgatgaggatgaagttgatgagactggtgctcctgtaagaaggaagcaaccgaag
aaaaggaggccgagacaagcattaggtgtttcatcatctgctttacaggaggcccatgag
atatttggggatgtcgatgagctgttgatgcttcgaaaacaaggccttgcaaggggtgct
ggtgattctgctgggtggggtgaaaagaggctagaagacgaatttgaaccatttattatt
tcagagaaatatatgacaccaaaggatgacattatacgagaaactgacattcctgagagg
attcaggtatctgaggatattacagggccgcctcctacagatgataagggtatagaggaa
gagagtgcctggatatataaccagctcactggtgatggtgtttcacaattagctggggag
gatcaggtagtcaaggaaatttataaggaggacattgggaatgtcttgacaatgatgcat
gtacaaaagcttgacgttcctttcattgctatgtaccggaaagagttatgtggcagtcta
ttgaaagattctgatgtcaacatgcaagatggtgaagaagcatcacgcagaatgaggtgg
caaaaggttctctgggctgttcataacttggacaaaaagtggttacttcttcagaagcgg
aagagtgctcttcagacatattacagtaaacgctttgaagaggaaaaaagaagagtttat
gatatgacgaggcttgaattgaatgatcaactttataaatcagtcactgacgcacttaat
gatgcacaatcagagagagaggttgatgatgtggatgcaaagtttaatttgcattttcct
cctggtgaagttgacattgaggaaggacaatttaaacggccaaaaaggaaatctttatat
agcatttgttataaggctggcctgtgggaggttgcggacaagtttggtgttaaatccgag
cagtttggattgcttctgtcacgagaagaagtgggcttaccagaactggaagatggaaag
caaactcctgaagaaattgctgcaaattttacatgtgcaatgtttgaaactccacaagat
gtacttaaaggtgcaaggcacatggcagcagttgagattagctgtgaacctatcgtgagg
aagcatgtccgcactacttttatggataaggctgttgtctcaacaagccctacacctgaa
ggaaatgtgactattgatccctatcaccaactttcaggtgtaaagtggctgcgaaacaag
ccattatctaagtttgtggatgcgcaatggctacttattcagaaagctgaagaagagaag
cttcttcaagttacaataaaattaccagaagatgttcagaaaaaattattaaacgatgct
aaagaagtctatctaagtgaatgcgtcagcaggtctgctcagctttggaatgaacaacgc
aaaatgatattggaagactcattctttacctatattcttccttcaatggaaaaggaagct
agatcattgttggctgcaggggccaagaattggcttcttatggaatatggaaagcaattg
tggaataaggtctctgttgcaccttttaagcgcaaggatgctgacaatgattccgaggat
gaatctgagttgagagtcatggcttgctgttgggggcctggaaaaccagcaactactttt
gtgatgttggattcagcaggagaaatggtggatgtgctgtatgctggttcgattagttct
cggtcccaggcagtcgctgagcaacaacgcaagaaaaatgaccagcaacgagtcttgaag
tttatgactgaccaccagcctcacgctgtctgtgttggagcagcaaacttgtcctgtagg
caactcaaggatgacatctatgaggttattttcaaaatagtggaagatcatccaagggat
gttagtggggagatagaaaattttcatatagtttttggtgatgaatctctgcctcgtcta
tatgagaactctcgggtttcttcagatcaactacctgggcagcctggtattgtgaaacgt
gctgtggctcttgggcgttaccttcaaaatcctttggcaatggttgcaacactttgtgga
ccaggaaaagagattttgtcatggaaactttgtccactagaacattttcttactcctgat
gagaagtatgaggtggttgaacaggtaatggtagatgcaaccaaccaagtgggtgttgat
gtaaatttagctgcaagccatgagtggctttttgctcctctacaatttgtttctggtctt
gggccacggaaagcttctgctttacagagagcatttgtaagggctgggtccattttcaat
cgcaaagagattccaatggggaagatcctgagaaagaaggttttcattaatgctgttgga
tttttgcgtgtacgccggagtggggcagcagctgctagtagtcatattatggacctcttg
gatgacactagaattcatccagagtcatatgatctggcaaaaaaattggctaaagatgtt
tatgctgaggatgctccgcaggaaccacatgagatggatgacgatgtacaggagatggca
attgaacatgtaagggaaaggccacatatgcttaaagcgcttgacattgatgaatatgca
aatagccatttcagagattctggtactaggaaaagagagacactttatgatataaagatg
gagttgctaaatggatttcaagactggcggatgccttacacggatccaaatcctgaggag
gagtttactatgctttctggtgaaacagaagatacgatttcagaaggaagaattgttcag
gtaactgttcgccatatgcaagacaaccggatcatttgtgcatttgattctggtttgaaa
gggttgattatggcagatgacatctcggatgatggatatgatcctgagaggttgcaaata
caggaaggtgacatcctcacctgcaagattaagaatgtaaataaaaatagatttgtggta
tatttgacctgcaaatccagtgagcttcggaaaagactatactttatacgtaaccgtgat
ccttattattatgaagatgagattagtttacgcagtgaccaagacaaggcccgcaaggaa
aaggaacttgcgaagaagcattttaagccaagaatgattgttcatccccgttttcaaaat
ttgacagctgatgaagcaatggagtatctctcagacaaggaagctggtgagagcattatt
cgcccaagctctaaaggaccatcatttttgactttgactttgaaaatattcgatggcgtc
tatgcccacaaagatattgttgaaggtggaaaagatcacaaggacatcacaagcttgctt
cgtttggggaaaacattaacaattgataaagacacttttgaagatcttgatgaggtgatg
gacaggtatgttgacccattggtaaatcacttgaaaaatatgcttgcatatcgcaaattc
aggaggggcacaaaagcagaagttgatgagctgctcaaggcagaaaaagcagagaatcca
atgaggattgtttactgttttggcatttctcatgagtatccaggaacttttattttgtcc
tacataaggagttcaaatccacatcatgaatacattgggttgtatcccaagggctttagg
tttcggaagagagattttgatgacattgatcgcctagtggcatatttccagaaaaacata
gacaaaccaccgcctgatgctggaccatctctccgaacagttgctgcaatggtaccaatg
aaaagccctgcatgggttggaagtggatctgctgggagtggttcagcaggtggcaatgat
ggctggagaggccaaacaagtttagacagggaaaggtcttctaccccagggtcaagaaca
ggtggcaggtttgattccagaaacaatagtggcggtcgagatggtcatcctagtgggctt
cctcggccagggcgtggccgtgggcgtggaagaggtaaccactttgctggcagttctgat
tttggttctgcaaaatggggttcaggttcaaaggatgaagatgatggcttgaacagcttt
cctggtgccaaagttcaaaattcacctgggagggaaaggttccctggcggttggggaggt
ggaggcagcggtggttcaggtggatggagcggtaataaccgcactggtaatgatggtgat
ggttggggaagcagtagcgctgctggcagtggtggtggcagagatggtggcactggtggt
tggagtgggggtggtagtgctggtggaggatgggttgagggtgggaatagtggtagcggt
ggaggcagtggctggggaggaggtggccgtagtagtggggggggcggcggcggcggcggt
gaatggggatcagctgccaatagtagtggcggcggcatcaatgcctggggtacttctggg
aatggtggcggcaactggggggcatctggaaatggtggtggtggtggtgggagggtttct
ggtggtagtggcagctctggcggcggcggcggcggcggcggcagaggtggctggggtggt
gaagcagcagcctctaaaggtctaggtggttcagactctggttttggtgctggcagttct
gggtggggcgactcaaagagagtggttcctccacaggcggatgctacaggtgggtggtct
ggggggagcgggggcggcggttggtaa
DBGET
integrated database retrieval system
