KEGG   Elaeis guineensis (African oil palm): 105045618
Entry
105045618         CDS       T03921                                 
Name
(RefSeq) uncharacterized protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105045618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egu03041]
    105045618
Spliceosome [BR:egu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    105045618
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 105045618
NCBI-ProteinID: XP_010922271
UniProt: A0A6I9RF07
LinkDB
Position
5:18280462..18288022
AA seq 392 aa
MANRTDPAAKSIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGSRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYMRLTGSVTDVYQYL
EPLYNDYRKLRRKLPDGKFCLTHVDEVIDELLTRDYSCDIALPRVQKRWTLEASGILEPR
RSALEEDFEEEEEKEEDEQAMDAYEADAHEKDYYHGRSPTRERDRDRKRDSYRYHRDRDY
DRDYGRGRERDRDRDREHGRDRDRERDRDRDRDRYRPRDEKDYGRERERERDRDGRERER
RDRDRGRRRSRSRSRSRDRRERDREDGDYRKRRARGSASPRRRPEEDGGAREEPRKKKEK
KEKKSDGTDHPDPEIAEANRLRASLGLAPLKL
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggcgaaccggacggatccggcggcgaagagcatacacgggacgaacccgcagaacctg
gtggagaagatcctgcggtcgaagatttaccagaacacctattggaaggagcagtgcttc
ggtctcaccgcggagacgctggtggacaaggccatggagctcgaccatcttggcggcacc
tacggtggcagccgcaagcccacccctttcatgtgcctcgtcatgaagatgctccagatc
cagcccgagaaggacatagtcgtcgagttcatcaagaacgaggactacaagtatgttcga
gttctcggggctttctacatgcgcctcaccgggtcggtcaccgatgtgtatcagtatctg
gagccgctctacaacgactaccgcaagcttcgccggaagctacctgatggaaagttttgc
ttgactcatgtggatgaagtcattgacgagctgctcacaagagattactcctgtgatatt
gctctcccacgggttcagaagaggtggactcttgaagcttctgggatattagaacccaga
agaagtgctttagaagaagattttgaagaggaagaagaaaaggaagaggatgagcaagct
atggatgcctatgaagctgatgctcatgaaaaggattactatcatggacggagtcccact
agggaaagagatagggacagaaaacgggacagctatagatatcacagggacagagactat
gatcgggactatggaagaggacgtgaaagagatcgagatagggacagagaacacggtaga
gatagggatagagaaagagatagggacagggacagagaccgctatcgtccaagagatgag
aaagattatggtcgagagagggagcgagagagggatagggatggcagagagcgggagaga
agagatcgagaccgtggacggcgtaggagtcgttcaaggagcaggagtagagatcgccga
gaacgagaccgtgaagatggtgattaccgtaagaggcgtgctcgtggcagtgcaagccct
cggaggcggcctgaggaggatggtggtgctcgggaggagcccaggaagaagaaggaaaag
aaagagaaaaagagtgatggaactgatcacccagatccagagattgcagaggccaataga
cttcgtgcttcacttgggctggcacctctgaagctgtga

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