Elaeis guineensis (African oil palm): 105046164
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Entry
105046164 CDS
T03921
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105046164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105046164
03036 Chromosome and associated proteins [BR:
egu03036
]
105046164
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105046164
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
105046164
COMPASS/SET1 complex (yeast)
105046164
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
ANAPC4_WD40
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
eIF2A
TRM82_WD
Beta-prop_ACSF4
WD_LRWD1
Beta-prop_NOL10_N
PAC11
Tricorn_2nd
WD40_RFWD3
PD40
Beta-prop_IFT122_2nd
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
105046164
NCBI-ProteinID:
XP_010922991
UniProt:
A0A6I9R9D5
LinkDB
All DBs
Position
2:complement(105465740..105474741)
Genome browser
AA seq
331 aa
AA seq
DB search
MSAIAGLDDETVRSMAVGSIFDDYVGKISCLDFHRTEDLLITSCEDDSIRLYNITNATLL
KMTYHKKHGADRVCFTHHPNSILCSSRYDLESTESLRYLSMYDNRCLRYFKGHKERVVSL
CMSPINDSFMSGSLDHSVRLWDLRVNACQGIMRLRGRPTVAYDQQGLVFAVAMEGGAIKL
FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL
EPSPNLTSEATFTPDGQYVVSGSGDGTLHAWNINKRSEVACWNSYIGVVTCLKWAPRRAM
FATASTVLTFWIPNQSKLNEECSTAEAGHGG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaatcgcaggactcgacgatgagaccgtccgcagcatggcagtcggttccatc
ttcgatgactatgtagggaaaataagttgtcttgattttcatcgtacagaagatctgctt
atcacctcatgtgaggatgattctatacgcctttataatatcacaaatgctacgttgctg
aagatgacatatcataagaagcatggtgctgatcgagtttgctttacacatcatccaaat
tccattttatgctcttcaagatatgatttggaatctacagaatctttgcggtacctttct
atgtatgataatcgttgcctacgctactttaaagggcacaaagagagagtggtttcactc
tgcatgtctcctatcaatgacagtttcatgtcaggatcactcgaccatagcgtaagatta
tgggatcttcgtgtaaatgcttgtcaggggattatgcggttacgtggtaggcctaccgtt
gcttatgatcaacaaggccttgtttttgcggttgcaatggaagggggtgctattaagttg
tttgattcccgttcttatgacaagggtccatttgacacctttctggttggtggagatact
gctgaggtttgtgatattaagttcagcaatgatggcaagtccatgctgttgacaacaaca
aataacaatatctatgttttagatgcctatggaggagagaagcgttgtggatttagcctg
gaaccatcacctaatttaacatctgaggctacctttactcctgatgggcaatacgtggtg
tcaggctctggagatggaaccttgcatgcttggaacatcaacaagcgaagtgaggtagcc
tgctggaacagttacattggtgttgtgacttgcttaaagtgggctccacgtcgtgccatg
tttgcaactgcatcaacagttcttactttctggatacctaaccaatccaagttgaatgag
gaatgcagcacagctgaagcgggacatggtggatga
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integrated database retrieval system
