Elaeis guineensis (African oil palm): 105046232
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Entry
105046232 CDS
T03921
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03420
Nucleotide excision repair
egu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105046232
09124 Replication and repair
03420 Nucleotide excision repair
105046232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egu04121
]
105046232
03400 DNA repair and recombination proteins [BR:
egu03400
]
105046232
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105046232
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105046232
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
PQQ_3
WD40_RFWD3
Beta-prop_IFT140_1st
Myco_haema
Motif
Other DBs
NCBI-GeneID:
105046232
NCBI-ProteinID:
XP_073114828
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All DBs
Position
5:133065495..133074722
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AA seq
563 aa
AA seq
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MPKLERGKASLPSSSFSPVVVQMETDSEESPFSSSSSSEGEEEEVGRVSDDEDERNDEEA
VEGEEEDRAKKRRKAPITISLKKVCKVCKGTGHEAGFRGATYIDCPRKPCFLCKRPGHTT
MSCPHRVAMEHGVIPAPRRNADTSLDYIFKRQLKAKIPMIKPTFVIPDHLDCGIIRFHSR
RVTCLEFHPTRTHVLLSGDKKGQLGIWDYGKLHEKTVYGSIHSCIVNNMKFNLENDGVLY
TSSSDGTVRCTDLETGTSFFLLDLNPEGWNGPATWRMLYGMDINVEKGLLLVADNFGYLY
LVDGRLKTRIAGPILIHKKGSKVVGLHCNPVQPDLFLSCGNDHFARIWDARRLEAESSLA
SLAHGRVVNSAYFSPLTGNKILTTSQDNRIRVWDSIFGNLESPSREIVHSHDFNRHLTPF
RAEWDPKDPSESLAVIGRYISENYEGVALHPIDFIDMSTGKLVAEVMNTDITTISPVTKL
HPRDDVLASGSSRSLFIWKPKGGKSPEQQLLEGKSKKIFGRVEKKSSGKLDGESDDDFDF
SSKEKKLRAKNLEGKYLSGQKKG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctagagagggggaaggcgtcgttgccgtcttcctctttctcgcctgtcgtg
gtccaaatggaaaccgattccgaggagagcccattctcctcatcgtcgtcgtcggaaggg
gaggaggaggaggttggtagggtttcggacgatgaggatgagaggaatgatgaggaagca
gtggagggagaagaggaggatcgtgctaagaagaggaggaaggctcccatcaccatctct
ctcaagaaagtctgcaaggtgtgcaagggtacggggcacgaagcgggttttaggggggcc
acctacattgattgccccaggaagccttgtttcctctgcaagaggcctggccatacgacg
atgtcttgtcctcaccgcgtcgctatggagcatggcgtcattccagccccccgaaggaac
gcagacacttcactggattacatcttcaagcgccagctgaaagctaaaattccaatgatc
aagccaacatttgtcatccctgatcacttggactgtggaataatcagattccacagcagg
cgtgtgacatgcttggagtttcatccaacgaggactcatgttcttttatcgggagacaag
aaagggcagcttggcatctgggattatggtaagctacatgaaaagacggtttatgggtcc
atacactcctgcatagtcaacaacatgaaattcaatctagaaaatgatggagtactgtat
acatcatcatcagatgggacggtcagatgcactgacttggagactggaacctcatttttc
ttgttggatcttaatccggagggatggaatggccctgcaacttggcgcatgctgtatggt
atggatataaatgttgagaaaggccttctgctagtggcagataacttcggatatctttac
ttggttgatggacggttgaagaccagaattgcaggaccaattctaatacataagaagggt
agcaaggttgttgggcttcactgtaatcctgttcaaccagatctttttctaagctgtgga
aatgaccactttgcacggatttgggatgctcgccggttagaagctgaatcttcacttgcc
agtcttgctcatggacgtgttgtgaactcagcatatttttcaccactgactggaaataaa
atcctgacaacatctcaagacaatcgaattcgagtgtgggattctatctttggcaatttg
gaatccccaagcagagagattgtccacagccatgatttcaatcgtcacttgactcctttc
cgagctgagtgggacccaaaggatccatcagaatctcttgcagttattggtcgttatata
agtgagaactatgagggggtggcattacatcccattgattttatagacatgagtacaggg
aagcttgtggcagaggtgatgaacacagacataacaaccatcagtcctgtgacgaagcta
catcctcgagatgatgtcttggcatcagggagctcaaggtcccttttcatttggaagcca
aaggggggtaagtctcctgaacaacagctgcttgaagggaaatccaagaaaatctttggc
agggttgagaagaaatccagtggaaagcttgatggtgaaagtgatgatgattttgatttc
tcttccaaggagaaaaaactcagagccaagaacttagaaggtaaatatttaagtggtcag
aagaagggttag
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