Elaeis guineensis (African oil palm): 105046771
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Entry
105046771 CDS
T03921
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105046771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105046771
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105046771
mRNA degradation factors
5'-3' decay
Decapping complex
105046771
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
105046771
NCBI-ProteinID:
XP_010923784
UniProt:
A0A6I9RCR2
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Position
6:complement(118775853..118791371)
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AA seq
814 aa
AA seq
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MRGLDGEGGVSENPNPNEDLRGGAADNARFDASQYAFFGKEVMEEVELGGLEDDDGDAGF
IGRDDEEYHFRSIGDREEVEGLGSLSDIDDLTSTFEKLNRTISDPRNAGVIGDRGSFSRE
SSSTADWTQEADSSNWIDQNILDAENYQEGKRWWSQPHPSSSRLSESKPLYRTSSYPQQP
QHASEPILAPKSSFTSYPPPGGRSQISSNLTRHASIPSLSAGLQMTPNLSPFSGPQLHLA
GLLHGLHYGGSMSQFASPGLTINSRSQNHWLNQATLFAGEHPNLLPNFLQQHLPQPNGLM
PSQLLSQQQQQRLQQVQPSLPQLSRLQSPLFNSHPPPQIRNKLDAVLSMSDLRDQRAKPS
QRGKQNMRFSQQSSDTSSQKGDNGWPQFRSKYMSAEEIESILRMQHAATHSNDPYIDDYY
HQACLAKKSAGSRLKHHFCPTFVRDLPSRARANNEPHAFLQVDALGRVPFSSIRRPRPLL
EVDPPSALGDGIHEQKSSVKPLEQEPMLAARITIEDGLSLLLDVDDVDRMLQFSQPPEGG
FQLRRRRQVLLEGLAASLELVDPLGPGKGGHSVGLAPKDDLVFLRLASLPKGRKLLSRYL
QLLIPGSELTRIVCMAIFRHLRFLFGGLPSDYSAAETTLNLAKIVSSCVRSMELSALSAC
LAAVVCSSEQPPLRPLGSSAGDGASIIIKSVLDLATELLTGSHAASNYSMSNRALWQASF
DAFFGLLTKYCLSKYDSIMQMLLMQAPNTSIIGSEAARAISREMPVELLRASLPHTNEHQ
RQMLLDFAQRSMPVTGFSAHGGGSGPVTSESVPG
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagggggctagatggggagggtggggtttccgaaaacccaaaccctaacgaagatctc
agaggtggtgctgcagataatgctcgctttgatgcctcacagtatgcattctttggtaag
gaggtcatggaggaagttgaattagggggtttggaagatgatgatggtgatgctggattt
atcggtcgtgatgatgaggaataccattttaggtctatcggagatagagaagaggttgaa
ggtttggggtctctatctgatatagatgatcttacaagcacttttgaaaagttgaacaga
actattagtgacccaaggaatgctggggttattggtgatagaggatctttttccagagaa
agttcttcaactgcagattggacacaggaggcagattcttcaaactggattgatcagaat
atactagatgctgaaaattatcaggagggtaaacgatggtggtcacagccacatccttca
tcatctcggctttcggaatctaaacccctgtacagaacatcctcatatcctcaacaacca
caacacgccagtgaaccaattcttgcacctaaatcatctttcacatcctaccctccacct
ggtggacgatctcagatttcatcaaacctcacacgtcatgcaagcattccatcccttagt
gctgggcttcagatgactccaaatctgtctcctttttctggtcctcagcttcatttggcg
ggactattgcatggactgcactatggtggaagcatgtctcagtttgcctctccaggcctc
acaattaatagccggtcgcagaatcactggttgaatcaagctaccctttttgcaggggaa
catccaaatctgttgcctaacttcctacagcaacatttgccacagccaaatggcttaatg
ccttcacagctactttcacagcagcaacagcagagactgcaacaggtccagccatctctg
ccccaattatctcgcttgcagtctcccttattcaactctcatcctcctccacaaataagg
aataagcttgatgcagttcttagtatgtctgacttgagagatcagagggccaagccatca
caaaggggaaaacagaacatgcgattttctcaacagtcgtctgataccagcagccagaag
ggtgataatgggtggccacagtttaggtccaagtacatgtcagctgaagagattgaaagc
attttgagaatgcagcatgctgcaactcacagcaatgatccttatatagacgattactac
caccaagcttgtcttgcaaaaaagtctgctggttcaagattgaagcaccatttctgcccg
acatttgttagggatctgccttctcgggcacgagctaataatgagccgcatgcattcctt
caggttgatgcacttgggagggttccgttttcttccattcgtaggccccgccctctcctt
gaagttgatccaccttcagccttgggtgatggcattcatgaacagaaatcttcagtaaag
ccccttgaacaagagccaatgctggcagctagaatcaccatcgaagatggcctttccctc
ctcctcgatgtagacgatgttgaccggatgttacaatttagccaaccaccagagggtggc
ttccaactgagacgcaggcgtcaggtcctcctggaaggccttgcagcatctcttgagctt
gtcgatccacttggcccaggtaaaggtggtcattcagttgggcttgccccaaaagatgat
cttgtgtttctacgcttagcatctctgccgaagggccggaagctcctgtcacgctacctt
cagcttcttattcctggaagtgaactcactcggatagtctgcatggccattttccggcac
ctacgttttttgtttggtggtttgccatcagattatagtgctgcagaaacgacattgaat
cttgccaagattgtttcttcatgtgtgcgcagtatggagcttagtgcactgagtgcttgc
cttgctgctgtggtttgctcatctgaacagccaccacttcgcccacttggaagttcagct
ggtgatggagcatccataattataaaatctgttcttgacctagcaacagaacttttgaca
ggctcccatgctgcaagcaactacagcatgtctaaccgagctctttggcaagcatcgttt
gatgccttttttgggcttctcacaaagtactgtctgagtaaatatgacagtataatgcaa
atgttgctcatgcaggcaccaaacacttcaattattgggtctgaagcagcgagagctata
agcagggagatgccagtggaactgctgcgtgcaagccttcctcatacaaatgagcaccag
cgccagatgttgcttgattttgcccagagatcaatgcctgtaactggttttagtgcccat
ggaggtggcagtggtcctgtaacctctgaatcagttcctggctaa
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