KEGG   Elaeis guineensis (African oil palm): 105047027
Entry
105047027         CDS       T03921                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105047027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egu03041]
    105047027
Spliceosome [BR:egu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105047027
 Complex C
   U5 SnRNP specific factors
    105047027
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 Beta-prop_SPT8 WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd eIF2A Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_HPS5 Cytochrom_D1
Other DBs
NCBI-GeneID: 105047027
NCBI-ProteinID: XP_010924106
UniProt: A0A6I9RBX4
LinkDB
Position
6:complement(28476937..28481660)
AA seq 343 aa
MLAAPSNNVLAVAGSRPGNQLATIPQSFQTPGPGGKQRTSSLESPIMLLTGHQSAIYTMK
FNPAGTVISSGSHDKDIFLWYVHGDCKNFMVLKGHKNAILDLQWTTDGTQLISASPDKTL
RAWDAETGKQVKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDLRMRGAIQTFPDK
YQITAVGFSDTADKIFTGGLDNDVKVWDLRRNEVIMTLQGHGDMITGMQLSPDGSYLLTN
GMDCTLRIWDMRPYAPQNRCVKIFTGHQHNFEKNLLKCSWSPDGSKVTAGSADRMVYIWD
TTSRRILYKLPGHNGSVNETVFHPTEPIIGSCGSDKQIYLGEL
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcttgctgcacctagcaacaatgtgttggctgttgcaggatcaagaccaggaaatcaa
ttggctaccattcctcaatcctttcaaactccaggtccaggtggaaagcagcggacctcc
agtcttgagtcacctataatgctgctcacaggtcaccagagtgctatatacaccatgaag
ttcaacccagcaggaactgtgataagttctgggtcccatgacaaggatatcttcttgtgg
tatgtccatggggattgcaaaaatttcatggtcttgaaaggacacaagaatgcaattctg
gacctccagtggaccactgatggaacccagttaatctcagcaagccctgacaagactctt
agagcatgggatgctgagaccgggaagcaagttaagaaaatggcagagcactcatctttt
gtgaactcgtgctgcccttcacgcaggggtccacctcttgttgtgagtggctccgatgat
ggaacagccaaactctgggatcttcgtatgaggggtgcgatccagacatttccagacaag
tatcagatcaccgccgtcggtttctcagatacagcagacaagatctttaccggtggatta
gacaatgatgtgaaggtgtgggatcttcgcagaaacgaggtgataatgactctccagggc
catggggacatgataacaggcatgcagctgagtcccgacgggtcttatctcttgactaac
ggcatggattgcacactacgtatctgggatatgcgcccctatgctccacagaaccgatgc
gtgaaaatttttacggggcaccagcacaactttgagaagaaccttttgaaatgtagctgg
tcacctgatgggagcaaggtcactgcaggtagtgcagaccggatggtatatatctgggat
acgacatcacgtcgcatcttgtataagcttcctgggcacaatggatctgtcaatgagact
gtgtttcaccctaccgagcccattattggatcttgcggcagtgacaagcagatctatctt
ggagaactttga

DBGET integrated database retrieval system