Elaeis guineensis (African oil palm): 105047037
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Entry
105047037 CDS
T03921
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105047037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105047037
03009 Ribosome biogenesis [BR:
egu03009
]
105047037
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105047037
Spliceosome [BR:
egu03041
]
Complex A
U1 snRNP components
U1 related factors
105047037
Complex B
105047037
Ribosome biogenesis [BR:
egu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105047037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Mito_fiss_reg
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105047037
NCBI-ProteinID:
XP_073115393
LinkDB
All DBs
Position
6:18270262..18287756
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AA seq
856 aa
AA seq
DB search
MTASASASSSRPRYAPEDPTLPKPWKALVDGSTGYLYYWNPETNVTQYERPVTELPPPPP
LLPPPPPHPPPKSASVAVSSSVLHNQRERDSHDDDGRHGRSRSSHQHGSARGSSSQHHGH
DARDSWNSRTASARVHGSSSDGGGALSAEAYRRQHEIIVTGDNVPAPYMTFESAGFPSEI
LKEIHHAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLFPGFIHLKRLRNNSKM
GPTVLVLAPTRELATQIEDEAVKFGRSSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPG
RLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEIPHRRQTLMFTATWPKEV
RKIAADLLVHPIQVNIGSIDDLVANNAITQYVEIITPMEKLRRLEQILRSQDPGSKVIIF
CSTKRMCDQLARTLTRQFGAAAIHGDKSQGERDRVLGQFRTGRSPILVATDVAARGLDIK
DIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLVKVLEGADQRVP
QELRDMVSRGGYGGKSRRWGSRSSARDSDRSRGSSDAIYGGRGARGLPPSTGRLDSGRVG
RGHDREPPRGRYDRGYRDXHEVEAVVRRSRDKHRSRSHSNSRSRAAAAAGSLSPKQVRNG
WDNSRSRSRSRSWNRGHSRSRSRSRSASQGIDRYDDRHGKGAGRAHRESPLARRMVPSPT
NHPIGSPVHSPKMPYYGDQRGSSPFNGDDMEKVQPGHSPSLRKERSVSPYGNMDGVKQER
SASPAQWHQGSLHDHGDAEGPNEQPVRSPSVPCNRSGEEEEEGMIPADEEDGVILSEEGT
TSPRTAPAEQPDSLNR
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcggcatcggcttcgtcgagcaggccgaggtacgccccggaggacccgacg
cttcccaaaccctggaaggccttggtggatgggagcacggggtatctctactactggaac
ccggagaccaacgtcacccagtacgagcggcccgtcaccgagctcccgcctcccccgcct
ctgctgcctcctccccctcctcatcctcctccgaaatctgcttccgtggccgtcagctct
tccgtccttcacaaccagcgggagcgggactctcatgacgatgatggccgccatggccgc
tcacgcagcagccatcagcatggaagtgcgagaggtagcagcagtcaacatcatgggcat
gatgcaagggattcatggaattcgaggacggcatctgccagagttcatggatcatcttcg
gatgggggaggtgctttgtctgcagaagcatatcgccgtcaacatgaaataatcgtcact
ggagataatgtaccagcaccatacatgacatttgagtctgcaggctttccttcagaaatt
ttaaaagagatacaccatgcaggtttctctgctcccactcctatccaggctcagtcttgg
ccaattgcattacaaagtcgtgacattgtagcgattgcaaagacaggatcaggcaaaact
cttggttatctttttccagggttcattcatcttaaacgccttcgtaacaactctaagatg
ggtccaacagtattggttctggcaccaactagggagttggcaacacagatagaggatgaa
gctgtgaagttcgggcgatcatcaagaatatcatgcacgtgtttatatggaggtgctccg
aaaggtccccagttgagggatttagaccgaggtgtagatgttgtggttgcaactccagga
agactaaatgacattttagagatgagaagagtaagcctccgtcaggtgtcatatctggtt
cttgacgaggctgaccgaatgctggacatgggttttgagccgcagatacggaaaattgta
aaagagataccccatcgccggcagactcttatgttcactgctacctggcctaaagaagtt
cggaaaatcgctgcagatctgcttgttcatcctattcaggttaacattgggagcatagat
gatcttgttgcaaacaatgcaattactcagtatgtggaaataattacacccatggaaaag
ctcagacggttggaacagatattgcgatcccaagatccgggttctaaggtcataatattt
tgctcaacgaagaggatgtgtgaccagcttgcaaggaccctcactcgtcagttcggtgct
gctgctattcacggtgacaagtctcagggtgagagagacagggttctaggccaatttcga
actggaaggtcccctatactagtagctactgatgttgctgctcgaggcctggacatcaag
gatatcagggttgtgatcaactacgacttccccacgggtgttgaagactatgttcacagg
attggcagaactggtagggcaggtgccactggtgtggcttacacatttttctgtgatcaa
gactcgaaatatgcagcagatcttgtcaaagttctggaaggggcagaccaacgcgttcct
caggagttacgggacatggtgtcacgtggtgggtatggtgggaagtcccgccgctggggt
tctcgctccagtgctcgtgatagcgatcggtcacgtggatctagtgatgccatttatggt
ggaaggggtgcacgtggcctgccaccttcaaccggtagattagatagtggtcgtgttggc
cgtggacatgatcgtgagcctcctcgtggcagatatgatcgtggatatcgagacnatcat
gaggtggaggctgttgttaggagatccagagataaacatcgtagccgtagccacagcaat
agccgcagtcgcgccgcagccgcagccggcagcctgagccctaaacaggtacgtaatggg
tgggacaatagccgcagtaggagccgtagcaggagctggaatcgtggccacagtcgaagc
aggagccgtagtcgcagtgctagccagggcattgatcggtatgatgaccgtcatggtaag
ggagctgggcgagcacatcgggaatcaccgctagcaaggagaatggtgccttcaccaacc
aaccatcctattggtagccctgttcattcaccaaaaatgccatactacggagatcagagg
ggatcatctccatttaatggtgacgacatggaaaaggttcaacccggtcactcacctagc
ctacggaaggagagatctgtttccccatatggcaatatggacggcgtaaagcaagaaaga
tcagctagcccagcacagtggcatcaaggttctctgcatgaccatggtgatgctgaaggg
cctaacgaacaacctgttcgatcaccatcagtgccttgcaataggagtggggaggaagaa
gaggaaggcatgatacctgcagatgaggaggatggcgtaatactctctgaagagggtaca
acatcgccgaggacagcaccagctgagcaaccagattcgctcaatcgataa
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