Elaeis guineensis (African oil palm): 105047315
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Entry
105047315 CDS
T03921
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105047315
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egu01009
]
105047315
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105047315
03036 Chromosome and associated proteins [BR:
egu03036
]
105047315
Protein phosphatases and associated proteins [BR:
egu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105047315
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105047315
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105047315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
105047315
NCBI-ProteinID:
XP_010924494
UniProt:
A0A6I9RDI0
LinkDB
All DBs
Position
6:complement(9040728..9053583)
Genome browser
AA seq
508 aa
AA seq
DB search
MNGKGTEDARAPAVPPTLEWKFSQVFGERTAGEEVQEVDIISAIEFDKYGDHLATGDRGG
RVVLFERTDVRDHGCRRDLERLDYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKI
RWCQMANGALFLLSTNDKTIKFWKVQEKKVKRISEMNLDPSQAAANGNIASSSTASPGVC
LPNGGCSYNHMSNEFSFPPGGFPSLHLPVVVASQETSLVARCRRIYAHAHDYHINSISNN
SDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHCNTLAYSS
SKGSIRLIDLRQSALCDNHSQLFEEAPGSRSFFTEIIASISDIKFGKDGRHILSRDYMTL
KLWDINMDSGPVATFQVHEYLRPKLCDLYESDSIFDKFECCLSGDGLRVATGSYSNLFRV
FGCVAGSTEATTLEASKTPMRRQGQNPARPARSLGSLTRTVRRGAESPGIDANGSSYDFT
TKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaagggaaccgaggacgccagggctccggcggtgccgcccaccctcgaatgg
aaattctcccaggtcttcggtgagcgtaccgcgggagaggaagtacaggaagtcgacatt
atttcagcaatagaatttgataaatacggggaccatcttgctactggagatagaggcggc
cgtgtagttttatttgaaaggacagatgttagagatcatggttgcagaagggatctagag
aggctagactatccaatcagcaggcatcctgaattccgctataaaacagaatttcaaagc
catgaaccagagtttgactaccttaagagcttggaaatagaagagaagatcaacaagatc
cgatggtgccaaatggccaatggtgcactgtttcttctctccaccaatgataaaacaatc
aaattttggaaggtgcaagaaaagaaggtgaaaagaatttctgagatgaatttggatcct
tctcaagctgcagcaaatggtaacattgctagctcaagtaccgccagccctggagtgtgc
cttccaaatggtggatgttcatacaatcatatgagcaatgaattttcctttcctcctgga
ggatttccatcattacatttgcctgtggtagtagcaagccaagaaacaagccttgttgct
cgatgtcgaagaatatatgctcatgcacatgattatcacatcaattcaatttctaataac
agcgatggtgagacgttcatatcagcagatgatttgcgaataaacctttggaatttggaa
attagcaaccagagttttaacattgttgatgtgaaacccacaaatatggaagatctaact
gaggtgattacatctgccgagtttcacccaactcattgcaacacattggcatatagtagc
tcaaagggctcaatacgactcattgatctgcgtcaatctgctttatgtgataatcattcc
cagctgtttgaggaggcaccaggttcaagatcattttttactgagatcattgcttcaatt
tcggatattaaatttggaaaagatggaaggcatattctaagccgtgattatatgacgctt
aagctatgggacataaacatggattctggtcctgttgcaacttttcaggtccatgaatat
ttaaggcctaagttatgtgatttatatgaaagtgactccatctttgacaaatttgagtgc
tgcctaagtggtgatggactacgggtagcaactggttcttacagcaatctctttcgtgtg
tttggttgtgttgctggaagcacagaggcgacaactttggaggccagcaaaactcctatg
agaagacaaggccaaaatcctgctaggcctgcaaggtctctgggcagtttgacacgcact
gtcagacgaggagcagaaagcccaggcattgatgcaaatggaagctcatatgatttcaca
acaaagttgctccatctagcatggcacccaactgagaattcgattgcctgtgctgctgca
aacagcttgtacatgtattatgcttag
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